RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZNF44P15621 663 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 MPZP25189 248 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 TAS2R43P59537 309 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 RPL31P62899 125 aaKnown RBP8.35□□□□□ -1.07
HERC1-212ENST00000561348 KLRD1Q13241 179 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 RSU1Q15404 277 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 KRTAP21-3Q3LHN1 58 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 DDI2Q5TDH0 399 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 TRAPPC6BQ86SZ2 158 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 ZNF561Q8N587 486 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 NANOGP1Q8N7R0 232 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 TPRX1Q8N7U7 411 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 OR52N4Q8NGI2 321 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 SDSLQ96GA7 329 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 OR14A2Q96R54 314 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 OR5M11Q96RB7 305 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 JMJD8Q96S16 334 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 TBX15Q96SF7 602 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 C19orf24Q9BVV8 132 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 C19orf12Q9NSK7 152 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 ZNF222Q9UK12 451 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 PCDHGB5Q9Y5G0 923 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 CUBNO60494 3623 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 MXRA5Q9NR99 2828 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 CENPVL3A0A0U1RRI6 287 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 TRIM77I1YAP6 450 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 HSPB6O14558 160 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 SH2D1BO14796 132 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 RGS10O43665 173 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 NOS1APO75052 506 aaPredicted RBP8.34□□□□□ -1.07
HERC1-212ENST00000561348 CDRT1O95170 752 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 MT-ND2P03891 347 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 TK1P04183 234 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 CCL3L1P16619 93 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 BDKRB2P30411 391 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 MAP2K4P45985 399 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 CAV3P56539 151 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 ERVK11-1P61568 191 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 GRK1Q15835 563 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 Q499Y3 187 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 DMKNQ6E0U4 476 aaPredicted RBP8.34□□□□□ -1.07
HERC1-212ENST00000561348 PHC2Q8IXK0 858 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 Q8IYB0 196 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 PNKDQ8N490 385 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 JAGN1Q8N5M9 183 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 PARP16Q8N5Y8 322 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 FBLIM1Q8WUP2 373 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 TMEM203Q969S6 136 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 DACT3Q96B18 629 aaPredicted RBP8.34□□□□□ -1.07
HERC1-212ENST00000561348 CPNE2Q96FN4 548 aaPredicted RBP8.34□□□□□ -1.07
HERC1-212ENST00000561348 ANKRD60Q9BZ19 345 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 SIRPDQ9H106 197 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 HES4Q9HCC6 221 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 EXOSC4Q9NPD3 245 aaKnown RBP8.34□□□□□ -1.07
HERC1-212ENST00000561348 PAK1IP1Q9NWT1 392 aaPredicted RBP8.34□□□□□ -1.07
HERC1-212ENST00000561348 FAM96BQ9Y3D0 163 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 ATRQ13535 2644 aa8.34□□□□□ -1.07
HERC1-212ENST00000561348 IGHV1-69DA0A0B4J2H0 117 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 IGKV1-12A0A0C4DH73 117 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 A0A1W2PPH5 198 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 GABRPO00591 440 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 DEGS1O15121 323 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 FSHBP01225 129 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 IGKV1D-12P01611 117 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 IGHV1-69P01742 117 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 CSTBP04080 98 aaKnown RBP8.33□□□□□ -1.08
HERC1-212ENST00000561348 SERPINA2P20848 420 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 COX7A1P24310 79 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 ZNF93P35789 620 aaPredicted RBP8.33□□□□□ -1.08
HERC1-212ENST00000561348 TGFBR2P37173 567 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 OR3A4PP47883 348 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 ERVFRD-1P60508 538 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 RIPK1Q13546 671 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 SPHARQ15513 63 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 DEFB112Q30KQ8 113 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 YIF1BQ5BJH7 314 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 LIPKQ5VXJ0 399 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 METAP1DQ6UB28 335 aaPredicted RBP8.33□□□□□ -1.08
HERC1-212ENST00000561348 ZNF782Q6ZMW2 699 aaPredicted RBP8.33□□□□□ -1.08
HERC1-212ENST00000561348 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
HERC1-212ENST00000561348 ZNF48Q96MX3 618 aaPredicted RBP8.33□□□□□ -1.08
HERC1-212ENST00000561348 ZNF184Q99676 751 aaPredicted RBP8.33□□□□□ -1.08
HERC1-212ENST00000561348 PPA2Q9H2U2 334 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 Q9H521 79 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 HMG20AQ9NP66 347 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 TMEM138Q9NPI0 162 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 FKBP14Q9NWM8 211 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 KPTNQ9Y664 436 aa8.33□□□□□ -1.08
HERC1-212ENST00000561348 TRAV8-7A0A075B6U6 113 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 TRBV23-1A0A0A0MS06 115 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 hCG_1809904A0A1W2PP81 198 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 A0A1W2PPE2 198 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 A0A1W2PR64 198 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 A0A1W2PRV1 198 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 TMEM82A0PJX8 343 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 MEIOCA2RUB1 952 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 DNAJC9-AS1A6NH13 148 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 K7N7A8 449 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 OR2H2O95918 312 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms