RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 A0A0A6YYD4 124 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 IGHV3-64DA0A0J9YX35 117 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 MEIOCA2RUB1 952 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 TMEM235A6NFC5 223 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 NAP1L6A6NFF2 107 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 MCRIP1C9JLW8 97 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 IFNL4K9M1U5 179 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 DEGS1O15121 323 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 SIAH2O43255 324 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 PDCD6O75340 191 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 PTTG1O95997 202 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 CD55P08174 381 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 IRF2P14316 349 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 IGFBP2P18065 325 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 GLRA1P23415 457 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 RCVRNP35243 200 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 GDNFP39905 211 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 ERVK11-1P61568 191 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 SNRPD2P62316 118 aaKnown RBP8.72□□□□□ -1.01
USP3-219ENST00000561326 IKZF1Q13422 519 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 DYRK1AQ13627 763 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 RBM39Q14498 530 aaKnown RBP8.72□□□□□ -1.01
USP3-219ENST00000561326 TESK1Q15569 626 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 MPPED2Q15777 294 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 SMIM21Q3B7S5 101 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 PLAC9Q5JTB6 97 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 SPIN3Q5JUX0 258 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 NKAPLQ5M9Q1 402 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 AGAP6Q5VW22 663 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 PRAMEF6Q5VXH4 476 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 WDR82Q6UXN9 313 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 FAM90A1Q86YD7 464 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 MUC15Q8N387 334 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 LILRB1Q8NHL6 650 aaPredicted RBP8.72□□□□□ -1.01
USP3-219ENST00000561326 ITLN1Q8WWA0 313 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 NEUROG1Q92886 237 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 HPS1Q92902 700 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 RNF7Q9UBF6 113 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 PPP1R3CQ9UQK1 317 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 RBMX2Q9Y388 322 aaKnown RBP8.72□□□□□ -1.01
USP3-219ENST00000561326 TANC2Q9HCD6 1990 aa8.72□□□□□ -1.01
USP3-219ENST00000561326 SPTAN1Q13813 2472 aaKnown RBP8.71□□□□□ -1.01
USP3-219ENST00000561326 ANKRD20A5PA0PJZ0 165 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 LRRC30A6NM36 301 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 FOXI3A8MTJ6 420 aaPredicted RBP8.71□□□□□ -1.02
USP3-219ENST00000561326 F8VVB4 439 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 F8VWA3 439 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 MFNGO00587 321 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 LYRM1O43325 122 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 LANCL1O43813 399 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 PTHLHP12272 177 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 LOXP28300 417 aaPredicted RBP8.71□□□□□ -1.02
USP3-219ENST00000561326 CHATP28329 748 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 SNU13P55769 128 aaKnown RBP8.71□□□□□ -1.02
USP3-219ENST00000561326 TAS2R19P59542 299 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 CCL8P80075 99 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 ZNF146Q15072 292 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 ZNF826PQ6ZT77 177 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 C6orf201Q7Z4U5 140 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 TRAPPC6BQ86SZ2 158 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 MOGAT3Q86VF5 341 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 CHPT1Q8WUD6 406 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 LRRC29Q8WV35 223 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 ST8SIA4Q92187 359 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 GTF3AQ92664 365 aaKnown RBP8.71□□□□□ -1.02
USP3-219ENST00000561326 TRIM63Q969Q1 353 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 ZNF488Q96MN9 340 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 HS3ST6Q96QI5 342 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 FAAP24Q9BTP7 215 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 IFT22Q9H7X7 185 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 HES4Q9HCC6 221 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 PLEKHA6Q9Y2H5 1048 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 NPTNQ9Y639 398 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 CACNG2Q9Y698 323 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 LRBAP50851 2863 aa8.71□□□□□ -1.02
USP3-219ENST00000561326 CHD6Q8TD26 2715 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 DOPEY1Q5JWR5 2465 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 FAM240BA0A1B0GVZ2 78 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 VGLL3A8MV65 326 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 H7C1Q1 480 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 HS3ST1O14792 307 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 PLA2G10O15496 165 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 KNG1P01042 644 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 AKAIN1P0CW23 69 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 ZNF44P15621 663 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 DUSP1P28562 367 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 GMFBP60983 142 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 GUCA2AQ02747 115 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 MST1LQ2TV78 715 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 SIGIRRQ6IA17 410 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 ACP7Q6ZNF0 438 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 C1orf87Q8N0U7 546 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 BATF2Q8N1L9 274 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 TMEM229BQ8NBD8 167 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 ENKURQ8TC29 256 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 Q8TCH9 128 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 NEK7Q8TDX7 302 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 NUDCD2Q8WVJ2 157 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms