RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SKP2Q13309 424 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OR2F1Q13607 317 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 HERPUD1Q15011 391 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PAFAH1B3Q15102 231 aaKnown RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 CDK10Q15131 360 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SHHQ15465 462 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 MPPED2Q15777 294 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 C4orf26Q17RF5 130 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TCTEX1D4Q5JR98 221 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TMEM255AQ5JRV8 349 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ZNF684Q5T5D7 378 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OTPQ5XKR4 325 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SAXO2Q658L1 398 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OR10K2Q6IF99 312 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 FAM71E1Q6IPT2 247 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ZNF343Q6P1L6 599 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OPN5Q6U736 354 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PLET1Q6UQ28 207 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PCSK4Q6UW60 755 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CXCL17Q6UXB2 119 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 GSG1LQ6UXU4 331 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 C9orf47Q6ZRZ4 202 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SLC36A1Q7Z2H8 476 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 C1QL2Q7Z5L3 287 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 C17orf82Q86X59 251 aaPredicted RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 UBALD2Q8IYN6 164 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 GAPTQ8N292 157 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CIARTQ8N365 385 aaPredicted RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 STX19Q8N4C7 294 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 C12orf29Q8N999 325 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 NKAPP1Q8N9T2 125 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 GATD1Q8NB37 220 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CSNK1G2-AS1Q8NCQ2 148 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ZNF439Q8NDP4 499 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OR10AD1Q8NGE0 317 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OR4C13Q8NGP0 309 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OR5K1Q8NHB7 308 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 JOSD2Q8TAC2 188 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ACTRT1Q8TDG2 376 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 HAVCR2Q8TDQ0 301 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SLC37A2Q8TED4 501 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 Q8WTZ3 238 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SKA2Q8WVK7 121 aaPredicted RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 BORCS7Q96B45 105 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TM4SF18Q96CE8 201 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ACY3Q96HD9 319 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SLC35G5Q96KT7 338 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 LYZL4Q96KX0 146 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 BIRC8Q96P09 236 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ZIM3Q96PE6 472 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 OR52E6Q96RD3 313 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 KIR2DL4Q99706 377 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 HOPXQ9BPY8 73 aaPredicted RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 LRRC61Q9BV99 259 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 EBPLQ9BY08 206 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 FGFBP2Q9BYJ0 223 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CHST5Q9GZS9 411 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 UGT1A7Q9HAW7 530 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TAS2R7Q9NYW3 318 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 DEC1Q9P2X7 70 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CLCF1Q9UBD9 225 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CTSZQ9UBR2 303 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CACNG5Q9UF02 275 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 VAX2Q9UIW0 290 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 KLK13Q9UKR3 277 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 HHLA2Q9UM44 414 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 MYRFQ9Y2G1 1151 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PYGO1Q9Y3Y4 419 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TOPBP1Q92547 1522 aa1.59□□□□□ -2.16
RTF1-207ENST00000561076 NFASCO94856 1347 aa1.59□□□□□ -2.16
RTF1-207ENST00000561076 EIF4G3O43432 1585 aaKnown RBP1.59□□□□□ -2.16
RTF1-207ENST00000561076 A0A1W2PP64 1363 aa1.59□□□□□ -2.16
RTF1-207ENST00000561076 EIF3AQ14152 1382 aaKnown RBP1.59□□□□□ -2.16
RTF1-207ENST00000561076 NUP153P49790 1475 aaKnown RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 TEX14Q8IWB6 1497 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CHD1O14646 1710 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 CLASP1Q7Z460 1538 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 IGHV3OR16-10A0A075B7F0 116 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 IGLV1-36A0A0B4J1U3 117 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 A0A0G2JN53 185 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 A0A0J9YXV3 536 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 A0A0J9YXY3 114 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 A0A0X1KG70 313 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 LOC389332A0A1B0GUA5 103 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 LOC105371267A0A1B0GV96 52 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 FUOMA2VDF0 154 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 FAM183AA6NL82 134 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 PPP5D1E7EU14 171 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 NDUFC2-KCTD14E9PQ53 114 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 H0Y9J4 135 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 K7EQS6 105 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 M0R1X1 148 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 PSPHP1O15172 72 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 ANGPTL7O43827 346 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 COX7A2P2O60397 106 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 GALR3O60755 368 aaPredicted RBP1.58□□□□□ -2.16
RTF1-207ENST00000561076 TNFSF13O75888 250 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 SERF1AO75920 110 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 OR2A4O95047 310 aa1.58□□□□□ -2.16
RTF1-207ENST00000561076 KCNK2O95069 426 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms