RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 DLL4Q9NR61 685 aa4.59□□□□□ -1.67
ZEB1-220ENST00000560909 PCDHB16Q9NRJ7 776 aa4.59□□□□□ -1.67
ZEB1-220ENST00000560909 PTTG2Q9NZH5 202 aa4.59□□□□□ -1.67
ZEB1-220ENST00000560909 RNF7Q9UBF6 113 aa4.59□□□□□ -1.67
ZEB1-220ENST00000560909 RAB22AQ9UL26 194 aa4.59□□□□□ -1.67
ZEB1-220ENST00000560909 MRPS28Q9Y2Q9 187 aaKnown RBP4.59□□□□□ -1.67
ZEB1-220ENST00000560909 POLDIP2Q9Y2S7 368 aa4.59□□□□□ -1.67
ZEB1-220ENST00000560909 ETV7Q9Y603 341 aa4.59□□□□□ -1.67
ZEB1-220ENST00000560909 AKAP9Q99996 3911 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ANKRD17O75179 2603 aaKnown RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 A0A0A6YYH2 397 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 IGHV1-69-2A0A0G2JMI3 117 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TMEM272A0A1B0GTI8 110 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 A6NJ64 397 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TMEM178BH3BS89 294 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 RAB27BO00194 218 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 LGALS8O00214 317 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TPD52L2O43399 206 aaKnown RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ANGPTL7O43827 346 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 PAHP00439 452 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 KNG1P01042 644 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 IGHV4-39P01824 125 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 APOA1P02647 267 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 GLAP06280 429 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 GRPP07492 148 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TMEM225BP0DP42 221 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ARSBP15848 533 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 MUC1P15941 1255 aaPredicted RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 AMY2BP19961 511 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 CPT2P23786 658 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 COL8A2P25067 703 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 LMO1P25800 156 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 SOX6P35712 828 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ETV6P41212 452 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 NPBWR2P48146 333 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 POU3F4P49335 361 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 RPS27AP62979 156 aaKnown RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 PAX5Q02548 391 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 IL13RA2Q14627 380 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ZNF404Q494X3 552 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 HES5Q5TA89 166 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 PRAMEF6Q5VXH4 476 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 SIGIRRQ6IA17 410 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 Q6P435 159 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ACP7Q6ZNF0 438 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ZNF826PQ6ZT77 177 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 LINC00596Q86U02 117 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 MOGAT3Q86VF5 341 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 LRRC28Q86X40 367 aaPredicted RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TGIF2LYQ8IUE0 185 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 LRRC75A-AS1Q8N1F1 130 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 PNLDC1Q8NA58 520 aaKnown RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TMEM104Q8NE00 496 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 OR51D1Q8NGF3 324 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 OR5H6Q8NGV6 325 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 NPRL2Q8WTW4 380 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TNFAIP8L1Q8WVP5 186 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 AP3S1Q92572 193 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 YIPF5Q969M3 257 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 CEP19Q96LK0 163 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 CST11Q9H112 138 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 DNTTIP1Q9H147 329 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 METTL9Q9H1A3 318 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 LPAR5Q9H1C0 372 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 MIXL1Q9H2W2 232 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 LIME1Q9H400 295 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 CXorf56Q9H5V9 222 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 SAP30LQ9HAJ7 183 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 PLGRKTQ9HBL7 147 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 MYOZ1Q9NP98 299 aaPredicted RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 DECR2Q9NUI1 292 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 TMEM106BQ9NUM4 274 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 BEX4Q9NWD9 120 aaPredicted RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 C1orf123Q9NWV4 160 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 RCC2Q9P258 522 aaKnown RBP4.58□□□□□ -1.68
ZEB1-220ENST00000560909 DAPK2Q9UIK4 370 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 ZNF222Q9UK12 451 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 PPP1R3CQ9UQK1 317 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 NPTNQ9Y639 398 aa4.58□□□□□ -1.68
ZEB1-220ENST00000560909 MALRD1Q5VYJ5 2156 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 CSMD2Q7Z408 3487 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 A0A0A6YYD4 124 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 A0A0B4J203 849 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 A0A1W2PP11 408 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 SMIM30A4D0T7 59 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 CCDC160A6NGH7 325 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 LRRC30A6NM36 301 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 VWC2LB2RUY7 222 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 TRAPPC2LH3BP13 241 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 H3BUI4 141 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 CTDSP2O14595 271 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 SPRY1O43609 319 aaPredicted RBP4.57□□□□□ -1.68
ZEB1-220ENST00000560909 NDUFA2O43678 99 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 CDC14BO60729 498 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 NDUFS7O75251 213 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 CA11O75493 328 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 CLPXO76031 633 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 IGHV2-70P01814 119 aa4.57□□□□□ -1.68
ZEB1-220ENST00000560909 CHRM2P08172 466 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms