RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PAHP00439 452 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 MT-ND2P03891 347 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 SCN1BQ07699 218 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 EDDM3AQ14507 147 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 KISS1Q15726 138 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 TMEM200BQ69YZ2 307 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 C1orf122Q6ZSJ8 110 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 Q8N7P7 452 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 C3orf56Q8N813 242 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR52N1Q8NH53 320 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 TFAP2CQ92754 450 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 C1orf147Q96MC9 270 aaPredicted RBP10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 FAM192AQ9GZU8 254 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 CHST6Q9GZX3 395 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 FAM234AQ9H0X4 552 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 IL36RNQ9UBH0 155 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 MEIOCA2RUB1 952 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 TMEM89A2RUT3 159 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 RNASEK-C17orf49H0YIS7 233 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 K7N7A8 449 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 SH2D1BO14796 132 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 NPFFO15130 113 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 CRYBA1P05813 215 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 RNASE1P07998 156 aaKnown RBP10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 PPP3R1P63098 170 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 GRK1Q15835 563 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 SPIN3Q5JUX0 258 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 METAP1DQ6UB28 335 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 Q6YL49 198 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 RNF144BQ7Z419 303 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 OR8H2Q8N162 312 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 ZFP41Q8N8Y5 198 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 SSMEM1Q8WWF3 244 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 TMEM106AQ96A25 262 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 SMIM19Q96E16 107 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 SNX22Q96L94 193 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 VCX3BQ9H321 246 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 EXOSC4Q9NPD3 245 aaKnown RBP10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 TAS2R4Q9NYW5 299 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 CNOT2Q9NZN8 540 aaKnown RBP10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 ZNF281Q9Y2X9 895 aa10.64□□□□□ -0.71
CTDSPL2-209ENST00000560620 BTBD17A6NE02 478 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 PTGES3LE9PB15 166 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 CLDN34H7C241 214 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 SIRPB1O00241 398 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 MELTFP08582 738 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 FBP1P09467 338 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 ZNF44P15621 663 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 CCL3L1P16619 93 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 SAA4P35542 130 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 UBE2E1P51965 193 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 AQP4P55087 323 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 TAS2R43P59537 309 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 FOXL1Q12952 345 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 C16orf87Q6PH81 154 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 ZNF782Q6ZMW2 699 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 PNKDQ8N490 385 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 PPP1R35Q8TAP8 253 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 NRG4Q8WWG1 115 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 RGP1Q92546 391 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 GHSRQ92847 366 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 NR1H4Q96RI1 486 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 HEXA-AS1Q9H8Q6 139 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 HMG20AQ9NP66 347 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 SCN3BQ9NY72 215 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 CKLFQ9UBR5 152 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 PSORS1C1Q9UIG5 152 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 ERGIC3Q9Y282 383 aa10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 SF3B6Q9Y3B4 125 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 SIRT4Q9Y6E7 314 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-209ENST00000560620 STAB1Q9NY15 2570 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 IGKV1-12A0A0C4DH73 117 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 OGG1O15527 345 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 ZNF737O75373 536 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 KDM4BO94953 1096 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 LALBAP00709 142 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 IGKV1D-12P01611 117 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 IGHV4-59P01825 116 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 COX7A1P24310 79 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 C21orf33P30042 268 aaPredicted RBP10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 LGALS4P56470 323 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 ACSM1Q08AH1 577 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 ZNF273Q14593 569 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 ZNF146Q15072 292 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 RSU1Q15404 277 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 TRAPPC6BQ86SZ2 158 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 SAXO1Q8IYX7 474 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 TPRX1Q8N7U7 411 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 OR51A2Q8NGJ7 313 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 OR13C5Q8NGS8 318 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 TNFAIP8L1Q8WVP5 186 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 S100A13Q99584 98 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 DPAGT1Q9H3H5 408 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 PLCXD1Q9NUJ7 323 aa10.62□□□□□ -0.71
CTDSPL2-209ENST00000560620 ING3Q9NXR8 418 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms