RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 P2RX4Q99571 388 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 YIPF3Q9GZM5 350 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 LAMP5Q9UJQ1 280 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 GYG2O15488 501 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 AMY1AP04745 511 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 AMY2AP04746 511 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 MNDAP41218 407 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 SLC35B1P78383 322 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 CLVS2Q5SYC1 327 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 MEPCEQ7L2J0 689 aaKnown RBP14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 TCF23Q7RTU1 214 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 RTN4RL2Q86UN3 420 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 ZNF695Q8IW36 515 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 ABHD12Q8N2K0 398 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 CREB3L1Q96BA8 519 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 SNX22Q96L94 193 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 PBOV1Q9GZY1 135 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 SLC25A19Q9HC21 320 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 GPR173Q9NS66 373 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 MOB4Q9Y3A3 225 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 HSPE1-MOB4S4R3N1 261 aa14.12□□□□□ -0.15
TSPAN3-208ENST00000560514 TCRBV3S1A0A5B6 114 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 ZNF737O75373 536 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 ZNF254O75437 659 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 DHRS3O75911 302 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 FAM106CPP0CH98 169 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 PRKACGP22612 351 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 SLC2A5P22732 501 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 PEX2P28328 305 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 LUMP51884 338 aaPredicted RBP14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 SLX4IPQ5VYV7 408 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 COMMD1Q8N668 190 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 TPRX1Q8N7U7 411 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 OR5M8Q8NGP6 311 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 RCHY1Q96PM5 261 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 DUX3Q96PT4 197 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 TEAD3Q99594 435 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 MROQ9BYG7 248 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 FAM206AQ9NX38 181 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 GAR1Q9NY12 217 aaKnown RBP14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 GLS2Q9UI32 602 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 TMEM14AQ9Y6G1 99 aa14.11□□□□□ -0.15
TSPAN3-208ENST00000560514 PQLC2LA1A4F0 135 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 SERPINE3A8MV23 424 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 CCL24O00175 119 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 BDH1Q02338 343 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 ROM1Q03395 351 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 FLOT2Q14254 428 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 GRK1Q15835 563 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 CCDC144NLQ6NUI1 221 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 ANGPTL5Q86XS5 388 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 TRMT10AQ8TBZ6 339 aaKnown RBP14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 ASB17Q8WXJ9 295 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 PKIBQ9C010 78 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 KLHDC2Q9Y2U9 406 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 SACSQ9NZJ4 4579 aa14.1□□□□□ -0.15
TSPAN3-208ENST00000560514 DLGAP1O14490 977 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 TOR1AO14656 332 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 FKBP6O75344 327 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 LY86O95711 162 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 GABRR1P24046 479 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 MPZP25189 248 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 CRISP1P54107 249 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 ERVK11-1P61568 191 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 RPS7P62081 194 aaKnown RBP14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 IL24Q13007 206 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 ZNF829Q3KNS6 432 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 SPATA24Q86W54 205 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 CEP19Q96LK0 163 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 NOL4LQ96MY1 436 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 CHST6Q9GZX3 395 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 GAL3ST2Q9H3Q3 398 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 GTF2A1LQ9UNN4 478 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 POMPQ9Y244 141 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 UBE2J1Q9Y385 318 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 SMAD5-AS1Q9Y6J3 95 aa14.09□□□□□ -0.15
TSPAN3-208ENST00000560514 SEC14L6B5MCN3 397 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 APOFQ13790 326 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 FAHD1Q6P587 224 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 ZNF679Q8IYX0 411 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 HS3ST5Q8IZT8 346 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 SLC7A6OSQ96CW6 309 aaPredicted RBP14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 RAX2Q96IS3 184 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 MNTQ99583 582 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 TVP23BQ9NYZ1 205 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 HHLA2Q9UM44 414 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 SLC7A11Q9UPY5 501 aa14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 ZNF256Q9Y2P7 627 aaPredicted RBP14.08□□□□□ -0.16
TSPAN3-208ENST00000560514 FAM230AA0A1W2PPH8 454 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 TMEM82A0PJX8 343 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 DYNC1I1O14576 645 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 INMTO95050 263 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 PRRX1P54821 245 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 ACTR3P61158 418 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 KIAA2026Q5HYC2 2103 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 TPTE2P1Q5T6R2 138 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 PRAMEF5Q5TYX0 476 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 TMEM236Q5W0B7 351 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 EGFL6Q8IUX8 553 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 FOXRED2Q8IWF2 684 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms