RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 C2orf68Q2NKX9 166 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 LIN54Q6MZP7 749 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 FBXL14Q8N1E6 418 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 Q8NFD4 153 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 OR5A2Q8NGI9 324 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 MARCH1Q8TCQ1 289 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 CMSS1Q9BQ75 279 aaKnown RBP15.25■□□□□ 0.03
SNX1-208ENST00000559844 PLSCR4Q9NRQ2 329 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 ST3GAL6Q9Y274 331 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 MPC1Q9Y5U8 109 aa15.25■□□□□ 0.03
SNX1-208ENST00000559844 C9orf170A2RU37 121 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A10PA6NDY2 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A18PA6NE21 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A16PA6NEW6 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A20PA6NIJ5 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A8PA6NJQ4 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A7PA6NKC0 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A22PA8MWA6 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A12PA8MX19 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A5PA8MXJ8 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A23PA8MXZ1 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 PRSS44E7EML9 344 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 SIX6O95475 246 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 SFTPBP07988 381 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A15PP0C7V4 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A13PP0C7W8 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A14PP0C7W9 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A24PP0C7X0 464 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 CHRNB4P30926 498 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 PMELP40967 661 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 ECI1P42126 302 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 ZNF81P51508 661 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 RBM11P57052 281 aaKnown RBP15.24■□□□□ 0.03
SNX1-208ENST00000559844 IL13RA1P78552 427 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 PPP1R1AQ13522 171 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 SLC25A26Q70HW3 274 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 LHFPL1Q86WI0 220 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 CALHM1Q8IU99 346 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 SLC7A5P1Q8MH63 180 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 RELL2Q8NC24 303 aaPredicted RBP15.24■□□□□ 0.03
SNX1-208ENST00000559844 PHB2Q99623 299 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 EHFQ9NZC4 300 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 ZNF230Q9UIE0 474 aaPredicted RBP15.24■□□□□ 0.03
SNX1-208ENST00000559844 GPR132Q9UNW8 380 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 ZG16O60844 167 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 GMFBP60983 142 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 OVCH2Q7RTZ1 564 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 TMEM200AQ86VY9 491 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 MKXQ8IYA7 352 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 ZNF610Q8N9Z0 462 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 TMEM185AQ8NFB2 350 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 MITD1Q8WV92 249 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 HPSE2Q8WWQ2 592 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 BOD1Q96IK1 185 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 FAAP24Q9BTP7 215 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 PIGMQ9H3S5 423 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 AK3Q9UIJ7 227 aa15.24■□□□□ 0.03
SNX1-208ENST00000559844 SPTBN1Q01082 2364 aaKnown RBP15.23■□□□□ 0.03
SNX1-208ENST00000559844 PLSCR5A0PG75 271 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 GEMIN2O14893 280 aaKnown RBP15.23■□□□□ 0.03
SNX1-208ENST00000559844 PDCD6O75340 191 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 ZNF14P17017 642 aaPredicted RBP15.23■□□□□ 0.03
SNX1-208ENST00000559844 HLA-GP17693 338 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 ARPC4P59998 168 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 SURF2Q15527 256 aaPredicted RBP15.23■□□□□ 0.03
SNX1-208ENST00000559844 GABRA6Q16445 453 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 PIGYQ3MUY2 71 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 ELP2Q6IA86 826 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 PEG10Q86TG7 708 aaKnown RBP15.23■□□□□ 0.03
SNX1-208ENST00000559844 C1orf162Q8NEQ5 155 aaPredicted RBP15.23■□□□□ 0.03
SNX1-208ENST00000559844 OR5M8Q8NGP6 311 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 OR13G1Q8NGZ3 307 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 CLEC4MQ9H2X3 399 aaPredicted RBP15.23■□□□□ 0.03
SNX1-208ENST00000559844 SLC23A1Q9UHI7 598 aa15.23■□□□□ 0.03
SNX1-208ENST00000559844 FLNCQ14315 2725 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 HMSDA8MTL9 139 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 ZNF732B4DXR9 585 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 J3QKU1 62 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 TPD52L2O43399 206 aaKnown RBP15.22■□□□□ 0.03
SNX1-208ENST00000559844 DUS4LO95620 317 aaKnown RBP15.22■□□□□ 0.03
SNX1-208ENST00000559844 AKR1C4P17516 323 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 S100A1P23297 94 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 SRSF4Q08170 494 aaKnown RBP15.22■□□□□ 0.03
SNX1-208ENST00000559844 TMEM128Q5BJH2 165 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 DCAF12L2Q5VW00 463 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 RFPL4BQ6ZWI9 263 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 MRGPRGQ86SM5 289 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 ADAD2Q8NCV1 583 aaKnown RBP15.22■□□□□ 0.03
SNX1-208ENST00000559844 OR10AD1Q8NGE0 317 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 LILRB4Q8NHJ6 448 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 CA5BP1Q8WTZ4 195 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 MAFIPQ8WZ33 124 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 CYYR1Q96J86 154 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 FN3KRPQ9HA64 309 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 CDH20Q9HBT6 801 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 UBR5O95071 2799 aaPredicted RBP15.22■□□□□ 0.03
SNX1-208ENST00000559844 OR5B21A6NL26 309 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 FAM90A27PA6NNH2 459 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 MSTNO14793 375 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 NFYAP23511 347 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms