RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 FAM110AQ9BQ89 295 aa6.98□□□□□ -1.29
SNRPA1-208ENST00000559686 EGLN3Q9H6Z9 239 aa6.98□□□□□ -1.29
SNRPA1-208ENST00000559686 ZNF286AQ9HBT8 521 aa6.98□□□□□ -1.29
SNRPA1-208ENST00000559686 RETNQ9HD89 108 aa6.98□□□□□ -1.29
SNRPA1-208ENST00000559686 FAM32AQ9Y421 112 aaKnown RBP6.98□□□□□ -1.29
SNRPA1-208ENST00000559686 HECTD4Q9Y4D8 3996 aa6.98□□□□□ -1.29
SNRPA1-208ENST00000559686 ARRDC5A6NEK1 342 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 OR5B21A6NL26 309 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 J3QT63 122 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 CXCR6O00574 342 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 TOR1AO14656 332 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 IDH3BO43837 385 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 APOC1P02654 83 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 IFNA6P05013 189 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 FAM106CPP0CH98 169 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 NCK1P16333 377 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 CDK2P24941 298 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 GDNFP39905 211 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 CEACAM3P40198 252 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 MNDAP41218 407 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 CDX1P47902 265 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 MEF2CQ06413 473 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 DGCR6Q14129 220 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 CRMP1Q14194 572 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 CBLL1Q75N03 491 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 ASRGL1Q7L266 308 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 HAPLN4Q86UW8 402 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 ANGPTL5Q86XS5 388 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 OR5A2Q8NGI9 324 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 ZNF596Q8TC21 504 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 DCUN1D4Q92564 292 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 OTULINQ96BN8 352 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 NRIP2Q9BQI9 281 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 SPATA25Q9BR10 227 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 RGCCQ9H4X1 137 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 MED20Q9H944 212 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 VIPAS39Q9H9C1 493 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 GPR173Q9NS66 373 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 ARGLU1Q9NWB6 273 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 KIAA1456Q9P272 454 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 AASSQ9UDR5 926 aa6.97□□□□□ -1.29
SNRPA1-208ENST00000559686 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.29
SNRPA1-208ENST00000559686 TMEM82A0PJX8 343 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 A6NIN4 97 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 CCRL2O00421 344 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 ZNF737O75373 536 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 IGHV3-7P01780 117 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 SPI1P17947 270 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 GABRR1P24046 479 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 OPRL1P41146 370 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 NUDT2P50583 147 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 INSL3P51460 131 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 SNU13P55769 128 aaKnown RBP6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 CTAG1AP78358 180 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 BDH1Q02338 343 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 GRK1Q15835 563 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 UTF1Q5T230 341 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 ASPHD1Q5U4P2 390 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 CATSPERDQ86XM0 798 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 OR8H1Q8NGG4 311 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 OR1N2Q8NGR9 330 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 TSPEARQ8WU66 669 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 THEM6Q8WUY1 208 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 C4orf3Q8WVX3 66 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 RNF133Q8WVZ7 376 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 TOMM40LQ969M1 308 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 ST6GALNAC6Q969X2 333 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 FAM162AQ96A26 154 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 INTS14Q96SY0 518 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 GNB4Q9HAV0 340 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 ZNF446Q9NWS9 450 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 ING3Q9NXR8 418 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 NDUFAF4Q9P032 175 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 LINC00312Q9Y6C7 94 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 SIRT4Q9Y6E7 314 aaPredicted RBP6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 V9GYQ6 96 aa6.96□□□□□ -1.3
SNRPA1-208ENST00000559686 NCBP2LA6PVI3 153 aaKnown RBP6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 F8VVB4 439 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 F8VWA3 439 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 BUB1B-PAK6H3BSN5 160 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 OVOL1O14753 267 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 GSC2O15499 205 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 TUSC2O75896 110 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 GADD45GO95257 159 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 IGLV1-47P01700 117 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 IGHG2P01859 326 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 CALCBP10092 127 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 NFYBP25208 207 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 DUSP1P28562 367 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 ESRRGP62508 458 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 LIPEQ05469 1076 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 SF3A3Q12874 501 aaKnown RBP eCLIP6.95□□□□□ -1.31e-6■■■■■ 37.9
SNRPA1-208ENST00000559686 FOXE3Q13461 319 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 FHL3Q13643 280 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 HLA-DRB5Q30154 266 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 TEX30Q5JUR7 227 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 FAM209BQ5JX69 171 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 ZNF684Q5T5D7 378 aa6.95□□□□□ -1.3
SNRPA1-208ENST00000559686 ZNF429Q86V71 674 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms