RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 CENPXA8MT69 81 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 G3V3Q6 166 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 PSIP1O75475 530 aaKnown RBP1.05□□□□□ -2.24
CASC4-210ENST00000559550 CTLA4P16410 223 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 CRABP2P29373 138 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 CCL23P55773 120 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 DAOAP59103 153 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 RPL31P62899 125 aaKnown RBP1.05□□□□□ -2.24
CASC4-210ENST00000559550 SLC35B1P78383 322 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 SLC35D2Q76EJ3 337 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 OR8B2Q96RD0 313 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 TSNAXQ99598 290 aaKnown RBP1.05□□□□□ -2.24
CASC4-210ENST00000559550 COA1Q9GZY4 146 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 KIR3DX1Q9H7L2 352 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 C6orf50Q9HD87 102 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 MRPL16Q9NX20 251 aaKnown RBP1.05□□□□□ -2.24
CASC4-210ENST00000559550 RBM12B-AS1Q9P1G2 102 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 OR5V1Q9UGF6 321 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 SLC7A11Q9UPY5 501 aa1.05□□□□□ -2.24
CASC4-210ENST00000559550 KMT2BQ9UMN6 2715 aaPredicted RBP1.05□□□□□ -2.24
CASC4-210ENST00000559550 LOC100653049A0A140TA62 436 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 A0A1W2PRF3 423 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 A0A1W2PRM7 423 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 A6NED7 52 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 COX7A2P2O60397 106 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 KRT34O76011 436 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 RLN2P04090 185 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 OR5AL1P0C617 328 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 P0DMU3 169 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 FAM231AP0DMU4 169 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 FAM231CP0DMU5 169 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 TAC1P20366 129 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 GZMHP20718 246 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 P2RY2P41231 377 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 CSKP41240 450 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 HTR2BP41595 481 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 IFFO1Q0D2I5 559 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 TOMM34Q15785 309 aaPredicted RBP1.04□□□□□ -2.24
CASC4-210ENST00000559550 BCL2A1Q16548 175 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 ZNF773Q6PK81 442 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 DPPA2Q7Z7J5 298 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 MARCH3Q86UD3 253 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 HS3ST5Q8IZT8 346 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 BBOF1Q8ND07 529 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 OR6K6Q8NGW6 343 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 LMX1AQ8TE12 382 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 MAL2Q969L2 176 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 QKIQ96PU8 341 aaKnown RBP eCLIP1.04□□□□□ -2.24
CASC4-210ENST00000559550 SHCBP1LQ9BZQ2 653 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 RHOFQ9HBH0 211 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 CFL2Q9Y281 166 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 FADS3Q9Y5Q0 445 aa1.04□□□□□ -2.24
CASC4-210ENST00000559550 TMEM131Q92545 1883 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 A0A1B0GTQ1 180 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 OR2AT4A6NND4 320 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 H7C2Y5 167 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 M0R1B8 84 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 GYG2O15488 501 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 SLC37A4O43826 429 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 PLEKHA8P1O95397 391 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 HLA-AP01891 365 aaKnown RBP1.03□□□□□ -2.24
CASC4-210ENST00000559550 MLNP12872 115 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 HOXB8P17481 243 aaPredicted RBP1.03□□□□□ -2.24
CASC4-210ENST00000559550 IVDP26440 423 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 CCT6AP40227 531 aaKnown RBP1.03□□□□□ -2.24
CASC4-210ENST00000559550 ATP6V1FQ16864 119 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 TTMPQ5BVD1 217 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 ZNF322Q6U7Q0 402 aaPredicted RBP1.03□□□□□ -2.24
CASC4-210ENST00000559550 LYZL2Q7Z4W2 148 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 ZNF738Q8NE65 137 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 OR2M3Q8NG83 312 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 C22orf15Q8WYQ4 148 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 RILPQ96NA2 401 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 YPEL4Q96NS1 127 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 ZNF436Q9C0F3 470 aaPredicted RBP1.03□□□□□ -2.24
CASC4-210ENST00000559550 SLC38A1Q9H2H9 487 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 WDR19Q8NEZ3 1342 aa1.03□□□□□ -2.24
CASC4-210ENST00000559550 PRRC2BQ5JSZ5 2229 aaKnown RBP1.03□□□□□ -2.25
CASC4-210ENST00000559550 TRGV4A0A0C4DH28 118 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 OPN1SWP03999 348 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 STAG3L3P0CL85 134 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 LIPCP11150 499 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 GTF2F2P13984 249 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 PSG4Q00888 419 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 GPR176Q14439 515 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 NDUFAF6Q330K2 333 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 Q499Y3 187 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 ATP6AP1LQ52LC2 224 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 UBE2NLQ5JXB2 153 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 SYT6Q5T7P8 510 aaPredicted RBP1.02□□□□□ -2.25
CASC4-210ENST00000559550 Q6ZRU5 148 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 OTUD6AQ7L8S5 288 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 TCF23Q7RTU1 214 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 TMCO2Q7Z6W1 182 aaPredicted RBP1.02□□□□□ -2.25
CASC4-210ENST00000559550 NELFCDQ8IXH7 590 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 FBXO36Q8NEA4 188 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.02□□□□□ -2.25
CASC4-210ENST00000559550 PEX13Q92968 403 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 PYURFQ96I23 114 aa1.02□□□□□ -2.25
CASC4-210ENST00000559550 NEURL4Q96JN8 1562 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms