RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 CBR3O75828 277 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 CTSBP07858 339 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 CT45A6P0DMU7 189 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 CT45A5P0DMU8 189 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 CT45A7P0DMV0 189 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 PNLIPRP2P54317 469 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 DHODHQ02127 395 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 CT45A1Q5HYN5 189 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 FHL5Q5TD97 284 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 MKXQ8IYA7 352 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 CT45A3Q8NHU0 189 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 RCC2Q9P258 522 aaKnown RBP6.3□□□□□ -1.4
USP3-210ENST00000559192 MYOTQ9UBF9 498 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 A6NDN8 102 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 DBX1A6NMT0 343 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 SERPINE3A8MV23 424 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 H3BMH7 237 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 SNCGO76070 127 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 HEXAP06865 529 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 ASAH2BP0C7U1 165 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 OR10J1P30954 320 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 FGF8P55075 233 aaPredicted RBP6.3□□□□□ -1.4
USP3-210ENST00000559192 LTC4SQ16873 150 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 OR5A2Q8NGI9 324 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 HDHD3Q9BSH5 251 aaPredicted RBP6.3□□□□□ -1.4
USP3-210ENST00000559192 PLEKHF2Q9H8W4 249 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 ZNF835Q9Y2P0 537 aa6.3□□□□□ -1.4
USP3-210ENST00000559192 LNP1A1A4G5 178 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 FIGNL2A6NMB9 653 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 E9PQ18 207 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 ADAM20O43506 726 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 ZNF217O75362 1048 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 GDF1P27539 372 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 GALR1P47211 349 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 MRPS21P82921 87 aaKnown RBP6.29□□□□□ -1.4
USP3-210ENST00000559192 ZNF92Q03936 586 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 MYBPHQ13203 477 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR5C1Q8NGR4 320 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR2I1PQ8NGU4 316 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR2AE1Q8NHA4 323 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 TAAR9Q96RI9 348 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 LRRC61Q9BV99 259 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 PARP11Q9NR21 331 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 TRAPPC2LQ9UL33 140 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 ST3GAL6Q9Y274 331 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 MRPS17Q9Y2R5 130 aaKnown RBP6.29□□□□□ -1.4
USP3-210ENST00000559192 IGHV5-51A0A0C4DH38 117 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 A0A1W2PP11 408 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 RBFOX3A6NFN3 312 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 C17orf51A8MQB3 221 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 DLK1P80370 383 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 ANKRD55Q3KP44 614 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 SPANXN5Q5MJ07 72 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 LINC01590Q5TEZ4 76 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 DPPA3Q6W0C5 159 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 AAED1Q7RTV5 226 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 SLC35G3Q8N808 338 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 SNX22Q96L94 193 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 GINS3Q9BRX5 216 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 SRPK3Q9UPE1 567 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 WASHC3Q9Y3C0 194 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 GBF1Q92538 1859 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 DOCK4Q8N1I0 1966 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.29□□□□□ -1.4
USP3-210ENST00000559192 IGHV3-64DA0A0J9YX35 117 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 K7EQM0 130 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 C1QL1O75973 258 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 NRASP01111 189 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 CD99P14209 185 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 IL2RGP31785 369 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 SUCLG1P53597 346 aaKnown RBP6.29□□□□□ -1.4
USP3-210ENST00000559192 TFF2Q03403 129 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 ZNF260Q3ZCT1 412 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 DHRS7BQ6IAN0 325 aaPredicted RBP6.29□□□□□ -1.4
USP3-210ENST00000559192 SPRED2Q7Z698 418 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR13G1Q8NGZ3 307 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 ST8SIA1Q92185 356 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 ELSPBP1Q96BH3 223 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 CIB3Q96Q77 187 aaPredicted RBP6.29□□□□□ -1.4
USP3-210ENST00000559192 SOX7Q9BT81 388 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR2D2Q9H210 308 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 NAA60Q9H7X0 242 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 WSB1Q9Y6I7 421 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR5H15A6NDH6 313 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 LINC00587B1AMM8 73 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 PRR32B1ATL7 298 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 FTCDNL1E5RQL4 147 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 H3BVH4 76 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OR5AL1P0C617 328 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 STARD4Q96DR4 205 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 OXGR1Q96P68 337 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 NAT8BQ9UHF3 227 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 RNF150Q9ULK6 438 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 IGKV1D-42A0A075B6H8 117 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 TNFSF11O14788 317 aa6.29□□□□□ -1.4
USP3-210ENST00000559192 EFSO43281 561 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms