RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 RNPEPL1Q9HAU8 725 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 PALMDQ9NP74 551 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 MAB21L2Q9Y586 359 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 IGHV2-70DA0A0C4DH43 119 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 LOC107986453A0A1B0GWG9 222 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 TMEM210A6NLX4 147 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 A8MXK9 166 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.01□□□□□ -1.13
SPG11-214ENST00000558989 J3QLI3 93 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 DVL1O14640 695 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 TCF21O43680 179 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 SYNGR1O43759 233 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 FCN3O75636 299 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 SULT1C4O75897 302 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 S100A5P33763 92 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 NANOS3P60323 173 aaKnown RBP8.01□□□□□ -1.13
SPG11-214ENST00000558989 ACTC1P68032 377 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ACTA1P68133 377 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 PRB3Q04118 309 aaPredicted RBP8.01□□□□□ -1.13
SPG11-214ENST00000558989 KRTAP24-1Q3LI83 254 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 CLVS2Q5SYC1 327 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 C1QL2Q7Z5L3 287 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 PDZD9Q8IXQ8 264 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 BCL6BQ8N143 479 aaPredicted RBP8.01□□□□□ -1.13
SPG11-214ENST00000558989 BPIFB2Q8N4F0 458 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ACBD7Q8N6N7 88 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 OR10AC1Q8NH08 325 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 RAB40AQ8WXH6 277 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 H1FXQ92522 213 aaKnown RBP8.01□□□□□ -1.13
SPG11-214ENST00000558989 Q96MT0 163 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 PCGF1Q9BSM1 259 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 V9GYS6 101 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
SPG11-214ENST00000558989 KIAA2026Q5HYC2 2103 aa8□□□□□ -1.13
SPG11-214ENST00000558989 TRAV40A0A0B4J280 105 aa8□□□□□ -1.13
SPG11-214ENST00000558989 SERTM2A0A1B0GWG4 89 aa8□□□□□ -1.13
SPG11-214ENST00000558989 SRRM5B3KS81 715 aa8□□□□□ -1.13
SPG11-214ENST00000558989 MPZL2O60487 215 aa8□□□□□ -1.13
SPG11-214ENST00000558989 WBP4O75554 376 aaKnown RBP8□□□□□ -1.13
SPG11-214ENST00000558989 VENTXO95231 258 aa8□□□□□ -1.13
SPG11-214ENST00000558989 IGHV4-38-2P0DP08 117 aa8□□□□□ -1.13
SPG11-214ENST00000558989 GATA3P23771 443 aa8□□□□□ -1.13
SPG11-214ENST00000558989 CEBPDP49716 269 aaPredicted RBP8□□□□□ -1.13
SPG11-214ENST00000558989 FGF12P61328 243 aa8□□□□□ -1.13
SPG11-214ENST00000558989 CDONQ4KMG0 1287 aa8□□□□□ -1.13
SPG11-214ENST00000558989 SLC25A30Q5SVS4 291 aa8□□□□□ -1.13
SPG11-214ENST00000558989 TEX36Q5VZQ5 186 aa8□□□□□ -1.13
SPG11-214ENST00000558989 WFDC3Q8IUB2 231 aa8□□□□□ -1.13
SPG11-214ENST00000558989 DHRSXQ8N5I4 330 aa8□□□□□ -1.13
SPG11-214ENST00000558989 OR5A2Q8NGI9 324 aa8□□□□□ -1.13
SPG11-214ENST00000558989 OR52I1Q8NGK6 324 aa8□□□□□ -1.13
SPG11-214ENST00000558989 OR2G2Q8NGZ5 317 aa8□□□□□ -1.13
SPG11-214ENST00000558989 DUX5Q96PT3 197 aa8□□□□□ -1.13
SPG11-214ENST00000558989 GPR61Q9BZJ8 451 aa8□□□□□ -1.13
SPG11-214ENST00000558989 TLNRD1Q9H1K6 362 aa8□□□□□ -1.13
SPG11-214ENST00000558989 OR51I2Q9H344 312 aa8□□□□□ -1.13
SPG11-214ENST00000558989 ELL3Q9HB65 397 aaPredicted RBP8□□□□□ -1.13
SPG11-214ENST00000558989 ABCB9Q9NP78 766 aa8□□□□□ -1.13
SPG11-214ENST00000558989 NKX1-2Q9UD57 310 aaPredicted RBP8□□□□□ -1.13
SPG11-214ENST00000558989 EXOGQ9Y2C4 368 aaKnown RBP8□□□□□ -1.13
SPG11-214ENST00000558989 ANKRD61A6NGH8 418 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 E9PI62 339 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 J3QRE1 110 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 FADS2O95864 444 aaKnown RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 LIPFP07098 398 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 SFTPBP07988 381 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 CALCBP10092 127 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 NDUFB7P17568 137 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 GTF2A1P52655 376 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 PLA1AQ53H76 456 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 KLF17Q5JT82 389 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 ZNF691Q5VV52 312 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 BRD3OSQ6XYD6 125 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 ZNF573Q86YE8 665 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 CALHM1Q8IU99 346 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 ZNF676Q8N7Q3 588 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 OR51A4Q8NGJ6 313 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 TMEM158Q8WZ71 300 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 AQP3Q92482 292 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 TMIGD2Q96BF3 282 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 FGGYQ96C11 551 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 PELI1Q96FA3 418 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 HRH4Q9H3N8 390 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 TRIM36Q9NQ86 728 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 ERVK13-1Q9NX77 482 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 NLKQ9UBE8 527 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 OR14J1Q9UGF5 321 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 RPL36Q9Y3U8 105 aaKnown RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 PCDHGB1Q9Y5G3 927 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 NKX6-3A6NJ46 265 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 OR5B21A6NL26 309 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 TNFRSF13BO14836 293 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 NDUFB3O43676 98 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 GNAO1P09471 354 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 MUC1P15941 1255 aaPredicted RBP7.99□□□□□ -1.13
SPG11-214ENST00000558989 ZNF20P17024 532 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 CAMPP49913 170 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 DLX1P56177 255 aa7.99□□□□□ -1.13
SPG11-214ENST00000558989 ISL1P61371 349 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms