RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 SNRPAP09012 282 aaKnown RBP1.33□□□□□ -2.2
VPS13C-207ENST00000558919 BGNP21810 368 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 ACOT2P49753 483 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 RGS6P49758 472 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 IFFO1Q0D2I5 559 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 DYNC1I2Q13409 638 aaKnown RBP1.33□□□□□ -2.2
VPS13C-207ENST00000558919 C18orf21Q32NC0 220 aaPredicted RBP1.33□□□□□ -2.2
VPS13C-207ENST00000558919 NDUFAF6Q330K2 333 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 IDNKQ5T6J7 187 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 SYT6Q5T7P8 510 aaPredicted RBP1.33□□□□□ -2.2
VPS13C-207ENST00000558919 ERICH5Q6P6B1 374 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 FAM131AQ6UXB0 335 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 CLEC19AQ6UXS0 136 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 SPNS3Q6ZMD2 512 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 SYS1Q8N2H4 156 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 Q8NDZ9 215 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 CACNG8Q8WXS5 425 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 SPACA5Q96QH8 159 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 UTP23Q9BRU9 249 aaKnown RBP1.33□□□□□ -2.2
VPS13C-207ENST00000558919 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 SYT4Q9H2B2 425 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 CHMP4BQ9H444 224 aaKnown RBP1.33□□□□□ -2.2
VPS13C-207ENST00000558919 PRORYQ9H606 182 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 RDH14Q9HBH5 336 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 VAPAQ9P0L0 249 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 STX18Q9P2W9 335 aaKnown RBP1.33□□□□□ -2.2
VPS13C-207ENST00000558919 PRO0628Q9UI54 55 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 TMEM94Q12767 1356 aa1.33□□□□□ -2.2
VPS13C-207ENST00000558919 GOLGA8QA0A0J9YX86 632 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 A0A1B0GW15 77 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 MGAT4DA6NG13 374 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 C9JQL5 133 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 D6RAR5 112 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 CETN3O15182 167 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 TCAPO15273 167 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 SC5DO75845 299 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 YEATS4O95619 227 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 HTR2BP41595 481 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 RANBP1P43487 201 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 KCNJ3P48549 501 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 DNASE1L1P49184 302 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 OR12D2P58182 307 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 RPL10AP62906 217 aaKnown RBP1.32□□□□□ -2.2
VPS13C-207ENST00000558919 ATP5G2Q06055 141 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 STX3Q13277 289 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 XRCC4Q13426 336 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 PMVKQ15126 192 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 PSG3Q16557 428 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 MRPL2Q5T653 305 aaKnown RBP1.32□□□□□ -2.2
VPS13C-207ENST00000558919 KCTD16Q68DU8 428 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF470Q6ECI4 717 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 FAM231DQ6ZW35 169 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 TRMT10CQ7L0Y3 403 aaKnown RBP1.32□□□□□ -2.2
VPS13C-207ENST00000558919 TCF24Q7RTU0 167 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 COMTD1Q86VU5 262 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 PDPNQ86YL7 162 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 LRRC8AQ8IWT6 810 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 NELFCDQ8IXH7 590 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 IQCF2Q8IXL9 164 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 OR4K2Q8NGD2 314 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 OR6K2Q8NGY2 324 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF420Q8TAQ5 688 aaPredicted RBP1.32□□□□□ -2.2
VPS13C-207ENST00000558919 FAM57AQ8TBR7 257 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 LGALS14Q8TCE9 139 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 DOK4Q8TEW6 326 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 YIPF6Q96EC8 236 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 RILPQ96NA2 401 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 OR2M4Q96R27 311 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 OR2V2Q96R30 315 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 MRPL20Q9BYC9 149 aaKnown RBP1.32□□□□□ -2.2
VPS13C-207ENST00000558919 SHCBP1LQ9BZQ2 653 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 TSGA10Q9BZW7 698 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 ABCG5Q9H222 651 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 SLC38A1Q9H2H9 487 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 GOLPH3Q9H4A6 298 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 SND1-IT1Q9HBX3 110 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 DDIT4Q9NX09 232 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 STMN3Q9NZ72 180 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 CD300AQ9UGN4 299 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 ELP1O95163 1332 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 MAP3K19Q56UN5 1328 aa1.32□□□□□ -2.2
VPS13C-207ENST00000558919 PLXNB3Q9ULL4 1909 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SLC5A10A0PJK1 596 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 IZUMO1RA6ND01 250 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 TVP23AA6NH52 213 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 C15orf65H3BRN8 121 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 K7EN84 100 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 ZMPSTE24O75844 475 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 IGHG2P01859 326 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 LIPCP11150 499 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 TEAD1P28347 426 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 IL12BP29460 328 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SLC18A1P54219 525 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 MAP3K7CLP57077 242 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 DSTNP60981 165 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 VSNL1P62760 191 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 IL5RAQ01344 420 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SYCP1Q15431 976 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 TNXAQ16473 311 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 ATP6AP1LQ52LC2 224 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms