RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 SCRN3Q0VDG4 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ADIPOQQ15848 244 aa8.8□□□□□ -1
TPM1-212ENST00000558347 VHLLQ6RSH7 139 aa8.8□□□□□ -1
TPM1-212ENST00000558347 RFPL4BQ6ZWI9 263 aa8.8□□□□□ -1
TPM1-212ENST00000558347 SKA3Q8IX90 412 aa8.8□□□□□ -1
TPM1-212ENST00000558347 MUC20Q8N307 709 aaPredicted RBP8.8□□□□□ -1
TPM1-212ENST00000558347 LRRC18Q8N456 261 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ZNF525Q8N782 197 aa8.8□□□□□ -1
TPM1-212ENST00000558347 PLPP7Q8NBV4 271 aa8.8□□□□□ -1
TPM1-212ENST00000558347 OR52B4Q8NGK2 314 aa8.8□□□□□ -1
TPM1-212ENST00000558347 TNFAIP8L1Q8WVP5 186 aa8.8□□□□□ -1
TPM1-212ENST00000558347 RBPMSQ93062 196 aaKnown RBP8.8□□□□□ -1
TPM1-212ENST00000558347 ZNF75AQ96N20 296 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ATPIF1Q9UII2 106 aa8.8□□□□□ -1
TPM1-212ENST00000558347 RHBDD3Q9Y3P4 386 aa8.8□□□□□ -1
TPM1-212ENST00000558347 SESN1Q9Y6P5 492 aa8.8□□□□□ -1
TPM1-212ENST00000558347 HIVEP2P31629 2446 aa8.8□□□□□ -1
TPM1-212ENST00000558347 IGHV2OR16-5A0A0B4J2B6 119 aa8.8□□□□□ -1
TPM1-212ENST00000558347 A0A1B0GW55 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 RFPL4AA6NLU0 287 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ZNF736B4DX44 427 aaPredicted RBP8.8□□□□□ -1
TPM1-212ENST00000558347 RFPL4AL1F8VTS6 287 aa8.8□□□□□ -1
TPM1-212ENST00000558347 GOSR2O14653 212 aa8.8□□□□□ -1
TPM1-212ENST00000558347 RER1O15258 196 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ERCC1P07992 297 aaPredicted RBP8.8□□□□□ -1
TPM1-212ENST00000558347 MMP7P09237 267 aaPredicted RBP8.8□□□□□ -1
TPM1-212ENST00000558347 DUX4L2P0CJ85 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 DUX4L3P0CJ86 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 DUX4L4P0CJ87 422 aa8.8□□□□□ -1
TPM1-212ENST00000558347 DUX4L5P0CJ88 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 DUX4L6P0CJ89 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 DUX4L7P0CJ90 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 CD79AP11912 226 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ZP3P21754 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ARR3P36575 388 aa8.8□□□□□ -1
TPM1-212ENST00000558347 SERPINF1P36955 418 aa8.8□□□□□ -1
TPM1-212ENST00000558347 H2BFSP57053 126 aa8.8□□□□□ -1
TPM1-212ENST00000558347 GRB2P62993 217 aaKnown RBP8.8□□□□□ -1
TPM1-212ENST00000558347 ECH1Q13011 328 aa8.8□□□□□ -1
TPM1-212ENST00000558347 GK2Q14410 553 aaPredicted RBP8.8□□□□□ -1
TPM1-212ENST00000558347 C4orf46Q504U0 113 aa8.8□□□□□ -1
TPM1-212ENST00000558347 TMEM65Q6PI78 240 aa8.8□□□□□ -1
TPM1-212ENST00000558347 SLC16A14Q7RTX9 510 aa8.8□□□□□ -1
TPM1-212ENST00000558347 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.8□□□□□ -1
TPM1-212ENST00000558347 CCDC36Q8IYA8 594 aa8.8□□□□□ -1
TPM1-212ENST00000558347 C12orf45Q8N5I9 185 aaPredicted RBP8.8□□□□□ -1
TPM1-212ENST00000558347 ZDHHC22Q8N966 263 aa8.8□□□□□ -1
TPM1-212ENST00000558347 NUP37Q8NFH4 326 aa8.8□□□□□ -1
TPM1-212ENST00000558347 OR4D10Q8NGI6 311 aa8.8□□□□□ -1
TPM1-212ENST00000558347 NANOS1Q8WY41 292 aaKnown RBP8.8□□□□□ -1
TPM1-212ENST00000558347 AQP3Q92482 292 aa8.8□□□□□ -1
TPM1-212ENST00000558347 FAM46BQ96A09 425 aa8.8□□□□□ -1
TPM1-212ENST00000558347 PRRT1Q99946 306 aa8.8□□□□□ -1
TPM1-212ENST00000558347 POFUT1Q9H488 388 aa8.8□□□□□ -1
TPM1-212ENST00000558347 CENPMQ9NSP4 180 aa8.8□□□□□ -1
TPM1-212ENST00000558347 DUX4Q9UBX2 424 aa8.8□□□□□ -1
TPM1-212ENST00000558347 TIMM10BQ9Y5J6 103 aa8.8□□□□□ -1
TPM1-212ENST00000558347 A0A0D9SG52 128 aa8.79□□□□□ -1
TPM1-212ENST00000558347 A0A1B0GTI1 187 aa8.79□□□□□ -1
TPM1-212ENST00000558347 TMEM269A0A1B0GVZ9 245 aa8.79□□□□□ -1
TPM1-212ENST00000558347 ZSCAN5BA6NJL1 495 aa8.79□□□□□ -1
TPM1-212ENST00000558347 SGCEO43556 437 aa8.79□□□□□ -1
TPM1-212ENST00000558347 SYNGR3O43761 229 aa8.79□□□□□ -1
TPM1-212ENST00000558347 OR4A8P0C604 315 aa8.79□□□□□ -1
TPM1-212ENST00000558347 OR4E1P0C645 316 aa8.79□□□□□ -1
TPM1-212ENST00000558347 PATE4P0C8F1 98 aa8.79□□□□□ -1
TPM1-212ENST00000558347 ZNF735P0CB33 412 aa8.79□□□□□ -1
TPM1-212ENST00000558347 ZNF14P17017 642 aaPredicted RBP8.79□□□□□ -1
TPM1-212ENST00000558347 ZNF32P17041 273 aa8.79□□□□□ -1
TPM1-212ENST00000558347 HLA-GP17693 338 aa8.79□□□□□ -1
TPM1-212ENST00000558347 BDKRB2P30411 391 aa8.79□□□□□ -1
TPM1-212ENST00000558347 OTX1P32242 354 aaPredicted RBP8.79□□□□□ -1
TPM1-212ENST00000558347 THBS4P35443 961 aa8.79□□□□□ -1
TPM1-212ENST00000558347 EFNA4P52798 201 aa8.79□□□□□ -1
TPM1-212ENST00000558347 FAM189A2Q15884 450 aa8.79□□□□□ -1
TPM1-212ENST00000558347 RGS7BPQ6MZT1 257 aaPredicted RBP8.79□□□□□ -1
TPM1-212ENST00000558347 ZNF529Q6P280 563 aa8.79□□□□□ -1
TPM1-212ENST00000558347 FAHD2BQ6P2I3 314 aaPredicted RBP8.79□□□□□ -1
TPM1-212ENST00000558347 CLEC2AQ6UVW9 174 aa8.79□□□□□ -1
TPM1-212ENST00000558347 GSG1LQ6UXU4 331 aa8.79□□□□□ -1
TPM1-212ENST00000558347 SLC51BQ86UW2 128 aa8.79□□□□□ -1
TPM1-212ENST00000558347 ZNF584Q8IVC4 421 aa8.79□□□□□ -1
TPM1-212ENST00000558347 FGFBP3Q8TAT2 258 aa8.79□□□□□ -1
TPM1-212ENST00000558347 FAHD2AQ96GK7 314 aa8.79□□□□□ -1
TPM1-212ENST00000558347 TMEM138Q9NPI0 162 aa8.79□□□□□ -1
TPM1-212ENST00000558347 FAM206AQ9NX38 181 aa8.79□□□□□ -1
TPM1-212ENST00000558347 RDH8Q9NYR8 311 aa8.79□□□□□ -1
TPM1-212ENST00000558347 TMA7Q9Y2S6 64 aaKnown RBP8.79□□□□□ -1
TPM1-212ENST00000558347 OR6C6A6NF89 314 aa8.78□□□□□ -1
TPM1-212ENST00000558347 MFSD2BA6NFX1 497 aa8.78□□□□□ -1
TPM1-212ENST00000558347 B9A039 149 aa8.78□□□□□ -1
TPM1-212ENST00000558347 F12P00748 615 aaPredicted RBP8.78□□□□□ -1
TPM1-212ENST00000558347 APOC1P02654 83 aa8.78□□□□□ -1
TPM1-212ENST00000558347 AMY2AP04746 511 aa8.78□□□□□ -1
TPM1-212ENST00000558347 ACSM4P0C7M7 580 aa8.78□□□□□ -1
TPM1-212ENST00000558347 UBBP0CG47 229 aa8.78□□□□□ -1
TPM1-212ENST00000558347 COX5BP10606 129 aa8.78□□□□□ -1
TPM1-212ENST00000558347 SLC25A4P12235 298 aa8.78□□□□□ -1
TPM1-212ENST00000558347 DSCR9P59020 149 aa8.78□□□□□ -1
TPM1-212ENST00000558347 RAB1AP62820 205 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms