RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 FGGYQ96C11 551 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 MALSU1Q96EH3 234 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 CHST5Q9GZS9 411 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 NEK6Q9HC98 313 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 FAM172BPA6NC97 362 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 A6NDX4 124 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 ODF3BA8MYP8 253 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 SULT1C4O75897 302 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 UBCP0CG48 685 aaKnown RBP12.54□□□□□ -0.4
TPM1-211ENST00000558314 RBP2P50120 134 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 RASSF2P50749 326 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 ZNF85Q03923 595 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 SCN1BQ07699 218 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 TMEM95Q3KNT9 176 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 LDLRAD2Q5SZI1 272 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 ZNF626Q68DY1 528 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 FAM58AQ8N1B3 248 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 OR4S1Q8NGB4 309 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 OR8J1Q8NGP2 316 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 ADAT3Q96EY9 351 aaPredicted RBP12.54□□□□□ -0.4
TPM1-211ENST00000558314 SPACA5Q96QH8 159 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 PRSS22Q9GZN4 317 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 GLS2Q9UI32 602 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 PITPNC1Q9UKF7 332 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 GSTK1Q9Y2Q3 226 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 SESN1Q9Y6P5 492 aa12.54□□□□□ -0.4
TPM1-211ENST00000558314 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 DAPL1A0PJW8 107 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 FAM90A8PA6NJQ4 464 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 PSPNO60542 156 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 OPN1MWP04001 364 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 OPN1MW2P0DN77 364 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 OPN1MW3P0DN78 364 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 ATF1P18846 271 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 AZGP1P25311 298 aaKnown RBP12.53□□□□□ -0.4
TPM1-211ENST00000558314 MEF2CQ06413 473 aaPredicted RBP12.53□□□□□ -0.4
TPM1-211ENST00000558314 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
TPM1-211ENST00000558314 PRAMEF5Q5TYX0 476 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 Q6ZSR3 168 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 TCF23Q7RTU1 214 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 Q8IYB0 196 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 ENTHD1Q8IYW4 607 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 DTX3Q8N9I9 347 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 OR5D18Q8NGL1 313 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 PP6455Q8WZ26 134 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 CFHR4Q92496 578 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 R3HDM4Q96D70 268 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 RNFT2Q96EX2 444 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 ORC6Q9Y5N6 252 aa12.53□□□□□ -0.4
TPM1-211ENST00000558314 IGHV2-26A0A0B4J1V2 119 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 J3QLW9 94 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 ENTPD6O75354 484 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 HTR1AP08908 422 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 ZNF19P17023 458 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 PRKACBP22694 351 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 CD24P25063 80 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 VDAC2P45880 294 aaPredicted RBP12.52□□□□□ -0.41
TPM1-211ENST00000558314 BLCAPP62952 87 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 ZNF91Q05481 1191 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 TMEM244Q5VVB8 128 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 BAIAP2L2Q6UXY1 529 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 Q6ZS46 218 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 CCDC54Q8NEL0 328 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 OR11H6Q8NGC7 330 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 OR13C3Q8NGS6 347 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 OR2G2Q8NGZ5 317 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 CAPSLQ8WWF8 208 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 PYDC1Q8WXC3 89 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 CENPNQ96H22 339 aaPredicted RBP12.52□□□□□ -0.41
TPM1-211ENST00000558314 GABARAPL3Q9BY60 117 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 MMP28Q9H239 520 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 TMEM133Q9H2Q1 129 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.41
TPM1-211ENST00000558314 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 LINC00312Q9Y6C7 94 aa12.52□□□□□ -0.41
TPM1-211ENST00000558314 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 MEGF11A6BM72 1044 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 MGST3O14880 152 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 MMP23AO75900 390 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 RBP4P02753 201 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 ZNF44P15621 663 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 LHFPL2Q6ZUX7 228 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 OR13C9Q8NGT0 318 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 OR10AC1Q8NH08 325 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 STMN2Q93045 179 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 OPALINQ96PE5 141 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
TPM1-211ENST00000558314 OSBPL10Q9BXB5 764 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 CLEC7AQ9BXN2 247 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 AASSQ9UDR5 926 aa12.51□□□□□ -0.41
TPM1-211ENST00000558314 TRBV2A0A0J9YWF9 115 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 H3BUI4 141 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 SH2D1BO14796 132 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 ATP5HO75947 161 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 OR3A1P47881 315 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 P2RX3P56373 397 aa12.5□□□□□ -0.41
TPM1-211ENST00000558314 TMED1Q13445 227 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms