RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NDNFQ8TB73 568 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 CLEC7AQ9BXN2 247 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 CHST5Q9GZS9 411 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 PLEKHA1Q9HB21 404 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 IL36RNQ9UBH0 155 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 POMPQ9Y244 141 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 H3BUI4 141 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 PSPNO60542 156 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 GATBO75879 557 aaKnown RBP12.76□□□□□ -0.37
SCFD1-224ENST00000557713 MMP23AO75900 390 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 DNAJC8O75937 253 aaPredicted RBP12.76□□□□□ -0.37
SCFD1-224ENST00000557713 CD33P20138 364 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 HTR1DP28221 377 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 NPBWR2P48146 333 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 ZNF91Q05481 1191 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 GRK1Q15835 563 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 ZBTB49Q6ZSB9 765 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 ENTHD1Q8IYW4 607 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 CCDC54Q8NEL0 328 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 OR4P4Q8NGL7 312 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 EMG1Q92979 244 aaKnown RBP12.76□□□□□ -0.37
SCFD1-224ENST00000557713 BORCS8Q96FH0 119 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 IL4I1Q96RQ9 567 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 TBX5Q99593 518 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 CHST6Q9GZX3 395 aa12.76□□□□□ -0.37
SCFD1-224ENST00000557713 A0A1W2PQL4 384 aaPredicted RBP12.75□□□□□ -0.37
SCFD1-224ENST00000557713 METTL15A6NJ78 407 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 SERPINA3P01011 423 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 OR2T7P0C7T2 308 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 GABRR1P24046 479 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 DUSP1P28562 367 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 ERP29P30040 261 aaKnown RBP12.75□□□□□ -0.37
SCFD1-224ENST00000557713 ZNF146Q15072 292 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 C16orf82Q7Z2V1 217 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 CENPVQ7Z7K6 275 aaPredicted RBP12.75□□□□□ -0.37
SCFD1-224ENST00000557713 GID4Q8IVV7 300 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 Q8IYB0 196 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 PRSS35Q8N3Z0 413 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 C10orf35Q96D05 121 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 ADI1Q9BV57 179 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 LIN7BQ9HAP6 207 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 KRT84Q9NSB2 600 aa12.75□□□□□ -0.37
SCFD1-224ENST00000557713 RBFOX1Q9NWB1 397 aaKnown RBP12.75□□□□□ -0.37
SCFD1-224ENST00000557713 WARS2Q9UGM6 360 aaKnown RBP12.75□□□□□ -0.37
SCFD1-224ENST00000557713 UBE2J1Q9Y385 318 aaPredicted RBP12.75□□□□□ -0.37
SCFD1-224ENST00000557713 MGST3O14880 152 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 GYG2O15488 501 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 SULT1C4O75897 302 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 MPIG6BO95866 241 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 BCL3P20749 454 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 CD24P25063 80 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 OR3A1P47881 315 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 RBP2P50120 134 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 ATP1B3P54709 279 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 BDH1Q02338 343 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 IL18R1Q13478 541 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 KDM4DQ6B0I6 523 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 BAIAP2L2Q6UXY1 529 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 ABHD12Q8N2K0 398 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 DNAAF1Q8NEP3 725 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 PP6455Q8WZ26 134 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
SCFD1-224ENST00000557713 DPM3Q9P2X0 92 aa12.74□□□□□ -0.37
SCFD1-224ENST00000557713 IGKV1-9A0A0C4DH69 117 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 TRBV2A0A0J9YWF9 115 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 G3V2T6 193 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 K7EIL1 84 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 ENTPD6O75354 484 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 IGLV1-47P01700 117 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 CALCBP10092 127 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 PF4V1P10720 104 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 HTR1FP30939 366 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 BRS3P32247 399 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 KIR3DL2P43630 455 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 P2RX3P56373 397 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 ISL1P61371 349 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 DNAL1Q4LDG9 190 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 OR52W1Q6IF63 320 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 CCDC121Q6ZUS5 278 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 RTN4RL2Q86UN3 420 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 RDH10Q8IZV5 341 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 CORO2AQ92828 525 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 MYDGFQ969H8 173 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 SLC7A6OSQ96CW6 309 aaPredicted RBP12.73□□□□□ -0.37
SCFD1-224ENST00000557713 HHLA2Q9UM44 414 aa12.73□□□□□ -0.37
SCFD1-224ENST00000557713 TSSC4Q9Y5U2 329 aaPredicted RBP12.73□□□□□ -0.37
SCFD1-224ENST00000557713 KMT2CQ8NEZ4 4911 aaKnown RBP12.73□□□□□ -0.37
SCFD1-224ENST00000557713 LOC107986453A0A1B0GWG9 222 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 AMY1AP04745 511 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 AMY2AP04746 511 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 PRKACAP17612 351 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 MTCP1P56278 107 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 CDC42P60953 191 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 ATP6AP1Q15904 470 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
SCFD1-224ENST00000557713 PRAMEF5Q5TYX0 476 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms