RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FAM192AQ9GZU8 254 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 FAM234AQ9H0X4 552 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 EXOSC4Q9NPD3 245 aaKnown RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 TMEM138Q9NPI0 162 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 PAK1IP1Q9NWT1 392 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 OPN4Q9UHM6 478 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 RRP15Q9Y3B9 282 aaKnown RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 KPTNQ9Y664 436 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 FN1P02751 2386 aaKnown RBP6.89□□□□□ -1.31
PSEN1-223ENST00000557511 IGKV1D-17A0A075B6S4 117 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 IGKV1-9A0A0C4DH69 117 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 SH2D1BO14796 132 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 SPRY1O43609 319 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-223ENST00000557511 HAND1O96004 215 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
PSEN1-223ENST00000557511 CD1AP06126 327 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 HSMCR30P0CW71 290 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF44P15621 663 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 GABRR1P24046 479 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 BDKRB2P30411 391 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 SNU13P55769 128 aaKnown RBP6.89□□□□□ -1.31
PSEN1-223ENST00000557511 EDDM3BP56851 147 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 RSU1Q15404 277 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 SPHARQ15513 63 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 KISS1Q15726 138 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 DGUOKQ16854 277 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 SPIN3Q5JUX0 258 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 DMKNQ6E0U4 476 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-223ENST00000557511 USP43Q70EL4 1123 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 KIR3DL3Q8N743 410 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 ZFP41Q8N8Y5 198 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 OR5D18Q8NGL1 313 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 TNFAIP8L1Q8WVP5 186 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 UFD1Q92890 307 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 SPACA5Q96QH8 159 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF184Q99676 751 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-223ENST00000557511 CDCA4Q9BXL8 241 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 SLITRK2Q9H156 845 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 METTL9Q9H1A3 318 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 HES4Q9HCC6 221 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 TAS2R4Q9NYW5 299 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 MTCH1Q9NZJ7 389 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 ING4Q9UNL4 249 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 GSTK1Q9Y2Q3 226 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 FAM96BQ9Y3D0 163 aa6.89□□□□□ -1.31
PSEN1-223ENST00000557511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.89□□□□□ -1.31
PSEN1-223ENST00000557511 ZANQ9Y493 2812 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 IGKV1-27A0A075B6S5 117 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 IGHV3OR16-10A0A075B7F0 116 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 A0A1B0GW55 424 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 M0R1W7 72 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ANGPTL7O43827 346 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF780AO75290 641 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 TK1P04183 234 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ALDOBP05062 364 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4L2P0CJ85 424 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4L3P0CJ86 424 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4L4P0CJ87 422 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4L5P0CJ88 424 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4L6P0CJ89 424 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4L7P0CJ90 424 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 BCL3P20749 454 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF93P35789 620 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 TGFBR2P37173 567 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 RANBP1P43487 201 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 MTNR1BP49286 362 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ERVK11-1P61568 191 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 RPL31P62899 125 aaKnown RBP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 PAX2Q02962 417 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 COL10A1Q03692 680 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 SCN1BQ07699 218 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ACSM1Q08AH1 577 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 BAMBIQ13145 260 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 GPR176Q14439 515 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 TRAM1Q15629 374 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DDI2Q5TDH0 399 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 NCR3LG1Q68D85 454 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 XAF1Q6GPH4 301 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4L9Q6RFH8 374 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 JAGN1Q8N5M9 183 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 CD177Q8N6Q3 437 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 C8orf46Q8TAG6 207 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 RPS4Y2Q8TD47 263 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 C22orf15Q8WYQ4 148 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 LHX4Q969G2 390 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 SNX22Q96L94 193 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 SLC6A7Q99884 636 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 METTL8Q9H825 291 aaKnown RBP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 TCF7L1Q9HCS4 588 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 HMG20AQ9NP66 347 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 RBFOX1Q9NWB1 397 aaKnown RBP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 FKBP14Q9NWM8 211 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 DUX4Q9UBX2 424 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF69Q9UC07 566 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF222Q9UK12 451 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 MAB21L2Q9Y586 359 aa6.88□□□□□ -1.31
PSEN1-223ENST00000557511 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 SONP18583 2426 aaKnown RBP6.88□□□□□ -1.31
PSEN1-223ENST00000557511 NF1P21359 2839 aa6.87□□□□□ -1.31
PSEN1-223ENST00000557511 MALRD1Q5VYJ5 2156 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms