RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PITPNC1Q9UKF7 332 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 FOXJ3Q9UPW0 622 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 LINC00312Q9Y6C7 94 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 TMEM82A0PJX8 343 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 EI24O14681 340 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 IGHA1P01876 353 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 ISG15P05161 165 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 ALPLP05186 524 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 OCM2P0CE71 109 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 OCMP0CE72 109 aaPredicted RBP11.45□□□□□ -0.58
SNX6-210ENST00000557341 VSIG10L2P0DP72 767 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 PRKACAP17612 351 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 BCL3P20749 454 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 PRKACBP22694 351 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 NPBWR2P48146 333 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 ACTA2P62736 377 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 ACTG2P63267 376 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 ZNF146Q15072 292 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 SSX2Q16385 188 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 SPIN3Q5JUX0 258 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 KCTD20Q7Z5Y7 419 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 FAM58AQ8N1B3 248 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 ZNF676Q8N7Q3 588 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 C11orf44Q8N8P7 122 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 PYDC1Q8WXC3 89 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
SNX6-210ENST00000557341 SPSB1Q96BD6 273 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 RNFT2Q96EX2 444 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 HRASLS5Q96KN8 279 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 OPALINQ96PE5 141 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 GLS2Q9UI32 602 aa11.45□□□□□ -0.58
SNX6-210ENST00000557341 IGKV1-9A0A0C4DH69 117 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 DAPL1A0PJW8 107 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 MEGF11A6BM72 1044 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 SNTNA6NMZ2 147 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 MGST3O14880 152 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 SLC16A6O15403 523 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 PSPNO60542 156 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 ENTPD6O75354 484 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 HTR1AP08908 422 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 ATF1P18846 271 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 SNU13P55769 128 aaKnown RBP11.44□□□□□ -0.58
SNX6-210ENST00000557341 MTCP1P56278 107 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 OR12D2P58182 307 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 MINOS1Q5TGZ0 78 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 MEDAGQ5VYS4 303 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 FDX2Q6P4F2 183 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 TRAPPC6BQ86SZ2 158 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 C1QL4Q86Z23 238 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 TPRX1Q8N7U7 411 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 MBOAT4Q96T53 435 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 ZNF702PQ9H963 129 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 FRRS1LQ9P0K9 344 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 HHLA2Q9UM44 414 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 MINOS1-NBL1R4GNA1 71 aa11.44□□□□□ -0.58
SNX6-210ENST00000557341 IGHV2-26A0A0B4J1V2 119 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 A6NDX4 124 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 J3QRE1 110 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 F2RL2O00254 374 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 FBXO24O75426 580 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 OPN1MWP04001 364 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 OPN1MW2P0DN77 364 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 OPN1MW3P0DN78 364 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 DUSP1P28562 367 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 RAB13P51153 203 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 CCR9P51686 369 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 DYNLT3P51808 116 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 P2RX3P56373 397 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 NANOS3P60323 173 aaKnown RBP11.43□□□□□ -0.58
SNX6-210ENST00000557341 SNRPGP62308 76 aaKnown RBP11.43□□□□□ -0.58
SNX6-210ENST00000557341 SLC25A30Q5SVS4 291 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 LDLRAD2Q5SZI1 272 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 CCBE1Q6UXH8 406 aaPredicted RBP11.43□□□□□ -0.58
SNX6-210ENST00000557341 ZBTB49Q6ZSB9 765 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 Q8N2B8 174 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 OR4S1Q8NGB4 309 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 OR52N4Q8NGI2 321 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 OR13C3Q8NGS6 347 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 NDNFQ8TB73 568 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 RFT1Q96AA3 541 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 FGGYQ96C11 551 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 MRPL48Q96GC5 212 aaKnown RBP11.43□□□□□ -0.58
SNX6-210ENST00000557341 C4orf36Q96KX1 117 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 EXOSC4Q9NPD3 245 aaKnown RBP11.43□□□□□ -0.58
SNX6-210ENST00000557341 UBE2J1Q9Y385 318 aaPredicted RBP11.43□□□□□ -0.58
SNX6-210ENST00000557341 PCDHGB5Q9Y5G0 923 aa11.43□□□□□ -0.58
SNX6-210ENST00000557341 A0A0G2JK05 382 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 SIRPB1O00241 398 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 ERP29P30040 261 aaKnown RBP11.42□□□□□ -0.58
SNX6-210ENST00000557341 OR3A1P47881 315 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 ALDH3A2P51648 485 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 SLC34A1Q06495 639 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 PDZK1IP1Q13113 114 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 IL18R1Q13478 541 aa11.42□□□□□ -0.58
SNX6-210ENST00000557341 HABP2Q14520 560 aaPredicted RBP11.42□□□□□ -0.58
SNX6-210ENST00000557341 ZIK1Q3SY52 487 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms