RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PDZK1IP1Q13113 114 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 GRK1Q15835 563 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 KLHL22Q53GT1 634 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 Q8IYB0 196 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 TPRX1Q8N7U7 411 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 SPSB1Q96BD6 273 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 ZCCHC4Q9H5U6 513 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 DHDHQ9UQ10 334 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 GSTK1Q9Y2Q3 226 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 DSCAML1Q8TD84 2053 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 TMEM212A6NML5 194 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 POM121CA8CG34 1229 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 SIRPB1O00241 398 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 ZNF737O75373 536 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 CCDC159P0C7I6 412 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 SOX2P48431 317 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 ETV1P50549 477 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 SCN1BQ07699 218 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 ZNF691Q5VV52 312 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 DHRS7BQ6IAN0 325 aaPredicted RBP13.49□□□□□ -0.25
VSX1-207ENST00000557285 C17orf107Q6ZR85 190 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 OR8H2Q8N162 312 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 SNX22Q96L94 193 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 RDH12Q96NR8 316 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 ZNF649Q9BS31 505 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 HEXA-AS1Q9H8Q6 139 aa13.49□□□□□ -0.25
VSX1-207ENST00000557285 IGKV1-12A0A0C4DH73 117 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 H3BUX3 64 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 NDUFA7O95182 113 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 IGKV1D-12P01611 117 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 LIMS3P0CW19 117 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 LIMS4P0CW20 117 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 LGALS4P56470 323 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 LY6EQ16553 131 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 PLA1AQ53H76 456 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 OR2G6Q5TZ20 316 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 OLFML2AQ68BL7 652 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 GDPGP1Q6ZNW5 385 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 C11orf42Q8N5U0 333 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 ZSCAN4Q8NAM6 433 aaPredicted RBP13.48□□□□□ -0.25
VSX1-207ENST00000557285 OR52N4Q8NGI2 321 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 SSX3Q99909 188 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 PPA2Q9H2U2 334 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 MRPS18AQ9NVS2 196 aaKnown RBP13.48□□□□□ -0.25
VSX1-207ENST00000557285 ING3Q9NXR8 418 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 GLS2Q9UI32 602 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 VPREB3Q9UKI3 123 aa13.48□□□□□ -0.25
VSX1-207ENST00000557285 PSPNO60542 156 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
VSX1-207ENST00000557285 ZNF728P0DKX0 622 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 TMEM225BP0DP42 221 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 MRPL28Q13084 256 aaKnown RBP13.47□□□□□ -0.25
VSX1-207ENST00000557285 MIDNQ504T8 468 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 XAF1Q6GPH4 301 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 TRAPPC6BQ86SZ2 158 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 SATL1Q86VE3 508 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 SERPINA12Q8IW75 414 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 DHRSXQ8N5I4 330 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 OR4S1Q8NGB4 309 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 OR5D14Q8NGL3 314 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 WFDC12Q8WWY7 111 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 NKX3-1Q99801 234 aaPredicted RBP13.47□□□□□ -0.25
VSX1-207ENST00000557285 HMG20AQ9NP66 347 aa13.47□□□□□ -0.25
VSX1-207ENST00000557285 FGF20Q9NP95 211 aaPredicted RBP13.47□□□□□ -0.25
VSX1-207ENST00000557285 EXOSC4Q9NPD3 245 aaKnown RBP13.47□□□□□ -0.25
VSX1-207ENST00000557285 CLPSL1A2RUU4 121 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 SULT1B1O43704 296 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 ARG1P05089 322 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 MYL12AP19105 171 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 DLX6P56179 175 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 DYNC1I2Q13409 638 aaKnown RBP13.46□□□□□ -0.25
VSX1-207ENST00000557285 IL18R1Q13478 541 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 TTC23Q5W5X9 447 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 BRICD5Q6PL45 260 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 TMPRSS11AQ6ZMR5 421 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 TCF23Q7RTU1 214 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 LHFPL4Q7Z7J7 247 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 BEND2Q8NDZ0 799 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.25
VSX1-207ENST00000557285 ZNF714Q96N38 554 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 NR1H4Q96RI1 486 aaPredicted RBP13.46□□□□□ -0.25
VSX1-207ENST00000557285 FAM192AQ9GZU8 254 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 TAS2R4Q9NYW5 299 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 CLEC2DQ9UHP7 191 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 RNF114Q9Y508 228 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 MMP24Q9Y5R2 645 aa13.46□□□□□ -0.25
VSX1-207ENST00000557285 A0A1B0GUS0 222 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 hADV38S2A0JD32 116 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 C17orf98A8MV24 154 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 SH2D1BO14796 132 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 OR2H2O95918 312 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 MT-ND2P03891 347 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 ZNF44P15621 663 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 DCKP27707 260 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 OR3A1P47881 315 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 RPL15P61313 204 aaKnown RBP13.45□□□□□ -0.26
VSX1-207ENST00000557285 ZNF146Q15072 292 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 KISS1Q15726 138 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 LRRC75BQ2VPJ9 315 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 SPIN3Q5JUX0 258 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms