RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SONP18583 2426 aaKnown RBP17.33■□□□□ 0.36
SEC23A-213ENST00000557280 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
SEC23A-213ENST00000557280 LOC105371242A0A075B767 164 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 A0A0G2JMP0 313 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 A0A0X1KG70 313 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 A0A1W2PP11 408 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 HAND1O96004 215 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 ZNF146Q15072 292 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 PDCD1Q15116 288 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 RSU1Q15404 277 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 FAM120AOSQ5T036 256 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 DCAF12L2Q5VW00 463 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 C22orf42Q6IC83 251 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 FAHD2BQ6P2I3 314 aaPredicted RBP17.32■□□□□ 0.36
SEC23A-213ENST00000557280 C1orf229Q6ZS94 237 aaPredicted RBP17.32■□□□□ 0.36
SEC23A-213ENST00000557280 BTN2A1Q7KYR7 527 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 PNLDC1Q8NA58 520 aaKnown RBP17.32■□□□□ 0.36
SEC23A-213ENST00000557280 OR4M2Q8NGB6 313 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 FAHD2AQ96GK7 314 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 MED30Q96HR3 178 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 C1orf147Q96MC9 270 aaPredicted RBP17.32■□□□□ 0.36
SEC23A-213ENST00000557280 OR51E2Q9H255 320 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 ZNF581Q9P0T4 197 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 MRPS28Q9Y2Q9 187 aaKnown RBP17.32■□□□□ 0.36
SEC23A-213ENST00000557280 INSIG2Q9Y5U4 225 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 HIVEP2P31629 2446 aa17.32■□□□□ 0.36
SEC23A-213ENST00000557280 PPIAL4CA0A0B4J2A2 164 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 TMEM82A0PJX8 343 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 ZNF737O75373 536 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 ARL6IP5O75915 188 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 NDUFB7P17568 137 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 GADD45AP24522 165 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 FGF12P61328 243 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 PIGYQ3MUY2 71 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 LRRC10Q5BKY1 277 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 ELP2Q6IA86 826 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 GLIPR1L1Q6UWM5 242 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 ZNF561Q8N587 486 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 RAB40AQ8WXH6 277 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 NUDT16L1Q9BRJ7 211 aaKnown RBP17.31■□□□□ 0.36
SEC23A-213ENST00000557280 OPN4Q9UHM6 478 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 STUB1Q9UNE7 303 aa17.31■□□□□ 0.36
SEC23A-213ENST00000557280 AK6Q9Y3D8 172 aaKnown RBP17.31■□□□□ 0.36
SEC23A-213ENST00000557280 SIRPB1O00241 398 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 HTR3BO95264 441 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 CD36P16671 472 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 SERPINA2P20848 420 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 MTNR1BP49286 362 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 CAPZA1P52907 286 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 SLC22A6Q4U2R8 563 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 SPIN3Q5JUX0 258 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 AWAT2Q6E213 333 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 METAP1DQ6UB28 335 aaPredicted RBP17.3■□□□□ 0.36
SEC23A-213ENST00000557280 CDH26Q8IXH8 852 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 ASCC1Q8N9N2 400 aaKnown RBP17.3■□□□□ 0.36
SEC23A-213ENST00000557280 Q8NFD4 153 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 H1FXQ92522 213 aaKnown RBP17.3■□□□□ 0.36
SEC23A-213ENST00000557280 METTL9Q9H1A3 318 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 KCNK15Q9H427 330 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 RNF167Q9H6Y7 350 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 RHOFQ9HBH0 211 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 EXOSC4Q9NPD3 245 aaKnown RBP17.3■□□□□ 0.36
SEC23A-213ENST00000557280 TMEM160Q9NX00 188 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 TXNL4BQ9NX01 149 aaKnown RBP17.3■□□□□ 0.36
SEC23A-213ENST00000557280 IL36GQ9NZH8 169 aa17.3■□□□□ 0.36
SEC23A-213ENST00000557280 RPUSD1Q9UJJ7 312 aaKnown RBP17.3■□□□□ 0.36
SEC23A-213ENST00000557280 MEGF11A6BM72 1044 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 PSPNO60542 156 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 OR2H2O95918 312 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 JUNBP17275 347 aaPredicted RBP17.29■□□□□ 0.36
SEC23A-213ENST00000557280 CAV3P56539 151 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 Q6P435 159 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 FIP1L1Q6UN15 594 aaKnown RBP17.29■□□□□ 0.36
SEC23A-213ENST00000557280 C17orf107Q6ZR85 190 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 UQCC2Q9BRT2 126 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 DCTN5Q9BTE1 182 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 CHST6Q9GZX3 395 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 SLITRK2Q9H156 845 aa17.29■□□□□ 0.36
SEC23A-213ENST00000557280 KIR2DS1A0A191URI9 304 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 TK1P04183 234 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 CHRM2P08172 466 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 CD37P11049 281 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 GALP22466 123 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 OR10A3P58181 314 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 C1orf100Q5SVJ3 147 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 GLT8D1Q68CQ7 371 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 TMEM104Q8NE00 496 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 OR51T1Q8NGJ9 327 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 TBC1D15Q8TC07 691 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 YIPF6Q96EC8 236 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 CHCHD6Q9BRQ6 235 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 SHARPINQ9H0F6 387 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 C7orf69Q9H7B7 122 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 VCX3AQ9NNX9 186 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 C19orf12Q9NSK7 152 aa17.28■□□□□ 0.36
SEC23A-213ENST00000557280 DOCK11Q5JSL3 2073 aa17.27■□□□□ 0.36
SEC23A-213ENST00000557280 SMIM30A4D0T7 59 aa17.27■□□□□ 0.36
SEC23A-213ENST00000557280 K7N7A8 449 aa17.27■□□□□ 0.36
SEC23A-213ENST00000557280 ENSAO43768 121 aaKnown RBP17.27■□□□□ 0.36
SEC23A-213ENST00000557280 GATA3P23771 443 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms