RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RBMS2Q15434 407 aaKnown RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 OR8B8Q15620 311 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 GSG1Q2KHT4 349 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 EIF2S3LQ2VIR3 472 aaKnown RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 SNAI3Q3KNW1 292 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 SLC22A6Q4U2R8 563 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 ACTBL2Q562R1 376 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 ATAD3CQ5T2N8 411 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 C1QTNF12Q5T7M4 302 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 PXDC1Q5TGL8 231 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 C9orf135Q5VTT2 229 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 NSUN5P2Q63ZY6 315 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 TMEM42Q69YG0 159 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 OR10K2Q6IF99 312 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 INO80CQ6PI98 192 aaPredicted RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 UNQ6126/PRO20091Q6UXV3 157 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 Q6ZS92 163 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 Q6ZT83 130 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 Q6ZTK2 550 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 MOB3CQ70IA8 216 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 MRPL21Q7Z2W9 205 aaKnown RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 TRAPPC6BQ86SZ2 158 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 BIVMQ86UB2 503 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 C1orf174Q8IYL3 243 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 TCTE3Q8IZS6 198 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 ZSCAN4Q8NAM6 433 aaPredicted RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 ZBTB8BQ8NAP8 495 aaPredicted RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 ACBD4Q8NC06 268 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 OR1K1Q8NGR3 316 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 OR6K3Q8NGY3 331 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 OR8S1Q8NH09 359 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 FGFBP3Q8TAT2 258 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 SSC4DQ8WTU2 575 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 CCDC107Q8WV48 283 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 UPRTQ96BW1 309 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 BORCS8Q96FH0 119 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 ST6GAL2Q96JF0 529 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 POM121L2Q96KW2 1035 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 PRRT1Q99946 306 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 GAL3ST1Q99999 423 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 C1orf43Q9BWL3 253 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 TMEM59Q9BXS4 323 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 LPAR5Q9H1C0 372 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 OR10A4Q9H209 315 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 ELL3Q9HB65 397 aaPredicted RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 NKIRAS2Q9NYR9 191 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 MYEF2Q9P2K5 600 aaKnown RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 CLCF1Q9UBD9 225 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 NOP16Q9Y3C1 178 aaKnown RBP3.82□□□□□ -1.8
SRP54-212ENST00000556992 LIPGQ9Y5X9 500 aa3.82□□□□□ -1.8
SRP54-212ENST00000556992 A0A0B4J293 547 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 A0A1B0GUH1 482 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 hCG_38984A0A1B0GV85 526 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 ANKRD30BLA7E2S9 258 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 SERPINE3A8MV23 424 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 RRP8O43159 456 aaKnown RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 RLN1P04808 185 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TPOP07202 933 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 IL6RP08887 468 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 GSTT2P0CG29 244 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 PTHLHP12272 177 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 CBR1P16152 277 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 HIST1H1DP16402 221 aaKnown RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 MGMTP16455 207 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 SELEP16581 610 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 CPT2P23786 658 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 ACKR3P25106 362 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 BLVRBP30043 206 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 PMELP40967 661 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 MRPS15P82914 257 aaKnown RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 PMP22Q01453 160 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 CD300CQ08708 224 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 PDZK1IP1Q13113 114 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 CBX3Q13185 183 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 GK2Q14410 553 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 CDK10Q15131 360 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 KCNJ8Q15842 424 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 GABRA6Q16445 453 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 C3AR1Q16581 482 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TBC1D28Q2M2D7 210 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 CEACAM21Q3KPI0 293 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 MOGAT2Q3SYC2 334 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 HIKESHIQ53FT3 197 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 RNASE10Q5GAN6 216 aaKnown RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 PLXDC2Q6UX71 529 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 GLDNQ6ZMI3 551 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 IDO2Q6ZQW0 420 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 NOXA1Q86UR1 476 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 FJX1Q86VR8 437 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TMEM200AQ86VY9 491 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TMEM17Q86X19 198 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 MKXQ8IYA7 352 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 SAXO1Q8IYX7 474 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 SPICQ8N5J4 248 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TMEM104Q8NE00 496 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 C1orf162Q8NEQ5 155 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 SLC30A7Q8NEW0 376 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 PXT1Q8NFP0 134 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 OR5A2Q8NGI9 324 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 OR51S1Q8NGJ8 323 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms