RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RBMS3Q6XE24 437 aaKnown RBP18.8■□□□□ 0.6
TDP1-216ENST00000556867 BRD3OSQ6XYD6 125 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 C1orf122Q6ZSJ8 110 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 VMO1Q7Z5L0 202 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 Q8N7P7 452 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 ZNF48Q96MX3 618 aaPredicted RBP18.8■□□□□ 0.6
TDP1-216ENST00000556867 C19orf24Q9BVV8 132 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 MND1Q9BWT6 205 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 DUSP21Q9H596 190 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 HMG20AQ9NP66 347 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 ESM1Q9NQ30 184 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 C19orf12Q9NSK7 152 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 TPRKBQ9Y3C4 175 aa18.8■□□□□ 0.6
TDP1-216ENST00000556867 STAB1Q9NY15 2570 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 DSCAML1Q8TD84 2053 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 MAGEB3O15480 346 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 HAND1O96004 215 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 ALDOBP05062 364 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 PRKACAP17612 351 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 VHLP40337 213 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 ACSM1Q08AH1 577 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 Q499Y3 187 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 METAP1DQ6UB28 335 aaPredicted RBP18.79■□□□□ 0.6
TDP1-216ENST00000556867 FAM185AQ8N0U4 392 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 ZDHHC22Q8N966 263 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 ASCC1Q8N9N2 400 aaKnown RBP18.79■□□□□ 0.6
TDP1-216ENST00000556867 SPATA3Q8NHX4 192 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 SGCDQ92629 289 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 LHX4Q969G2 390 aa18.79■□□□□ 0.6
TDP1-216ENST00000556867 IGHV1-69DA0A0B4J2H0 117 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 PNMA8CA0A1B0GUJ8 204 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 IGHV1-69P01742 117 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 CELP19835 753 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 RPL31P62899 125 aaKnown RBP18.78■□□□□ 0.6
TDP1-216ENST00000556867 PPP3R1P63098 170 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 IRF3Q14653 427 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 RUSC1-AS1Q66K80 236 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 UNKLQ9H9P5 680 aaKnown RBP18.78■□□□□ 0.6
TDP1-216ENST00000556867 TMEM138Q9NPI0 162 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 SIRT7Q9NRC8 400 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 RAB26Q9ULW5 256 aa18.78■□□□□ 0.6
TDP1-216ENST00000556867 LSM2Q9Y333 95 aaKnown RBP18.78■□□□□ 0.6
TDP1-216ENST00000556867 SOX21Q9Y651 276 aaPredicted RBP18.78■□□□□ 0.6
TDP1-216ENST00000556867 TRBV5-7A0A0A0MS05 114 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 TRIM77I1YAP6 450 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 GABRPO00591 440 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 GPX5O75715 221 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 TMEM225BP0DP42 221 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 IGFBP3P17936 291 aaPredicted RBP18.77■□□□□ 0.6
TDP1-216ENST00000556867 FSTP19883 344 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 BLMHQ13867 455 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 OR8H2Q8N162 312 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 PXT1Q8NFP0 134 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 OR52N4Q8NGI2 321 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 TBC1D15Q8TC07 691 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 SNX22Q96L94 193 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 PRDM13Q9H4Q3 707 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 METTL8Q9H825 291 aaKnown RBP18.77■□□□□ 0.6
TDP1-216ENST00000556867 GLS2Q9UI32 602 aa18.77■□□□□ 0.6
TDP1-216ENST00000556867 TMEM82A0PJX8 343 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 CALCBP10092 127 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 CRHBPP24387 322 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 DUSP1P28562 367 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 SPHARQ15513 63 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 C17orf107Q6ZR85 190 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 OR5D13Q8NGL4 314 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 TNFRSF14Q92956 283 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 ORAI1Q96D31 301 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 CNBD2Q96M20 576 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 OR14A2Q96R54 314 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 GPER1Q99527 375 aa18.76■□□□□ 0.59
TDP1-216ENST00000556867 A0A1W2PPH5 198 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 DNAJC9-AS1A6NH13 148 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 PRTN3P24158 256 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 BDKRB2P30411 391 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 SNU13P55769 128 aaKnown RBP18.75■□□□□ 0.59
TDP1-216ENST00000556867 UBA52P62987 128 aaKnown RBP18.75■□□□□ 0.59
TDP1-216ENST00000556867 GUCA2AQ02747 115 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 DEFB112Q30KQ8 113 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 DDI2Q5TDH0 399 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 NCR3LG1Q68D85 454 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 TMEM200BQ69YZ2 307 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 SATL1Q86VE3 508 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.75■□□□□ 0.59
TDP1-216ENST00000556867 OR4M1Q8NGD0 313 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 FAM216AQ8WUB2 273 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 TNFAIP8L1Q8WVP5 186 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 THRSPQ92748 146 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 C1orf147Q96MC9 270 aaPredicted RBP18.75■□□□□ 0.59
TDP1-216ENST00000556867 OR5M11Q96RB7 305 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 ZMAT3Q9HA38 289 aaKnown RBP18.75■□□□□ 0.59
TDP1-216ENST00000556867 EXOSC4Q9NPD3 245 aaKnown RBP18.75■□□□□ 0.59
TDP1-216ENST00000556867 CKLFQ9UBR5 152 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 GSTK1Q9Y2Q3 226 aa18.75■□□□□ 0.59
TDP1-216ENST00000556867 MDFIC2A0A1B0GVS7 189 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 RNASEK-C17orf49H0YIS7 233 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 SH2D1BO14796 132 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 RGS10O43665 173 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 PSPNO60542 156 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 MTNR1BP49286 362 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms