RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PCM1Q15154 2024 aa15.17■□□□□ 0.02
PTPN21-208ENST00000556564 HRASP01112 189 aa15.17■□□□□ 0.02
PTPN21-208ENST00000556564 FAHD2BQ6P2I3 314 aaPredicted RBP15.17■□□□□ 0.02
PTPN21-208ENST00000556564 OR1K1Q8NGR3 316 aa15.17■□□□□ 0.02
PTPN21-208ENST00000556564 FAHD2AQ96GK7 314 aa15.17■□□□□ 0.02
PTPN21-208ENST00000556564 PPIAL4EA0A075B759 164 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 PPIAL4DF5H284 164 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 COX7A2P2O60397 106 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 PPIAL4FP0DN26 164 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 UBE2KP61086 200 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 SSBP1Q04837 148 aaKnown RBP15.16■□□□□ 0.02
PTPN21-208ENST00000556564 GVQW1Q8N7I0 195 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 PPIAL4AQ9Y536 164 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 OOEPA6NGQ2 149 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 TMEM210A6NLX4 147 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 SULT1A3P0DMM9 295 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 SULT1A4P0DMN0 295 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 HGDQ93099 445 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 HNF1AP20823 631 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 RNF141Q8WVD5 230 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 KLK13Q9UKR3 277 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 ZFC3H1O60293 1989 aaKnown RBP15.16■□□□□ 0.02
PTPN21-208ENST00000556564 RFPL4AA6NLU0 287 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 RFPL4AL1F8VTS6 287 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 FGF7P21781 194 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 BPIFB3P59826 476 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 IGLV3-21P80748 117 aaPredicted RBP15.16■□□□□ 0.02
PTPN21-208ENST00000556564 COL10A1Q03692 680 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 AK3Q9UIJ7 227 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 A0A0G2JMM0 328 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 A0A1W2PPB8 328 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 A0A1W2PRS3 328 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 KIR3DP1A8MWS1 328 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 HOXA6P31267 233 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 C2orf50Q96LR7 162 aa15.16■□□□□ 0.02
PTPN21-208ENST00000556564 SLC25A10Q9UBX3 287 aaPredicted RBP15.16■□□□□ 0.02
PTPN21-208ENST00000556564 TRAV39A0A0B4J263 110 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 GABRB1P18505 474 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 OPRK1P41145 380 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 FAM27BQ5VT28 67 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 TMEM56Q96MV1 263 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 CHODLQ9H9P2 273 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 RYDENQ9NUL5 291 aaKnown RBP15.15■□□□□ 0.02
PTPN21-208ENST00000556564 PYCARD-AS1I3L0S3 204 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 OGG1O15527 345 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 ONECUT2O95948 504 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 FPR2P25090 351 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 FGF9P31371 208 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-208ENST00000556564 DYRK2Q92630 601 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 ADGRG7Q96K78 797 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 MS4A18H0YCH9 400 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 J3QT63 122 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 OR7C2O60412 319 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-208ENST00000556564 UBE2G1P62253 170 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 LY6DQ14210 128 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 TNXAQ16473 311 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 MS4A18Q3C1V0 323 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 ZNF770Q6IQ21 691 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-208ENST00000556564 KCNIP4Q6PIL6 250 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 SPICQ8N5J4 248 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 OR2V2Q96R30 315 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 CCL19Q99731 98 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 SFXN3Q9BWM7 321 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 OR5H14A6NHG9 310 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 SOCS1O15524 211 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 TMEM127O75204 238 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 RAB5BP61020 215 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 TMEM267Q0VDI3 215 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-208ENST00000556564 HABP2Q14520 560 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-208ENST00000556564 COL19A1Q14993 1142 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 CTHRC1Q96CG8 243 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 AKR1E2Q96JD6 320 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 CHRNA10Q9GZZ6 450 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 IL36GQ9NZH8 169 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 IGKV3-11P04433 115 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 GIPP09681 153 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-208ENST00000556564 LINC00271P0C7V0 271 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 RAB4AP20338 218 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 PSMB6P28072 239 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 MVDP53602 400 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 OR13D1Q8NGV5 346 aa15.15■□□□□ 0.02
PTPN21-208ENST00000556564 GOSR1O95249 250 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 RPL12P30050 165 aaKnown RBP15.14■□□□□ 0.01
PTPN21-208ENST00000556564 AESQ08117 197 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 APCDD1LQ8NCL9 501 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 OR5A2Q8NGI9 324 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 C10orf35Q96D05 121 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 E5RGE8 158 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 SSX8Q7RTT4 187 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 SRRQ9GZT4 340 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 NSG2Q9Y328 171 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 ABCA7Q8IZY2 2146 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 UBE2L5PA0A1B0GUS4 154 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 UMODP07911 640 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 PMELP40967 661 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 SUCLG1P53597 346 aaKnown RBP15.14■□□□□ 0.01
PTPN21-208ENST00000556564 FOXB2Q5VYV0 432 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 ACSM6Q6P461 480 aa15.14■□□□□ 0.01
PTPN21-208ENST00000556564 WDR13Q9H1Z4 485 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms