RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 F8VVB4 439 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 F8VWA3 439 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 SSX4O60224 188 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 CYB5R3P00387 301 aaPredicted RBP9.43□□□□□ -0.9
FOXN3-212ENST00000556541 CHRM2P08172 466 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 GPR6P46095 362 aaPredicted RBP9.43□□□□□ -0.9
FOXN3-212ENST00000556541 KCNJ3P48549 501 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 CAV3P56539 151 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 ARL6IP1Q15041 203 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 ZMYND11Q15326 602 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 IDNKQ5T6J7 187 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 RAB12Q6IQ22 244 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 ZNF788Q6ZQV5 615 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 TGIF2LYQ8IUE0 185 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 ZNF525Q8N782 197 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 RAB40AQ8WXH6 277 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 PERPQ96FX8 193 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 DMRTB1Q96MA1 342 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 PIMREGQ9BSJ6 248 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 FAM234AQ9H0X4 552 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 MMP27Q9H306 513 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 TMEM165Q9HC07 324 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 RCC2Q9P258 522 aaKnown RBP9.43□□□□□ -0.9
FOXN3-212ENST00000556541 RABL2AQ9UBK7 228 aaPredicted RBP9.43□□□□□ -0.9
FOXN3-212ENST00000556541 DNAJB11Q9UBS4 358 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 MIOXQ9UGB7 285 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 RABL2BQ9UNT1 228 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 CSMD1Q96PZ7 3565 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
FOXN3-212ENST00000556541 METTL21EPA6NDL7 271 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 FOXI3A8MTJ6 420 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-212ENST00000556541 F5H0A9 414 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-212ENST00000556541 SH2D1BO14796 132 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 GPR37O15354 613 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 HTR3BO95264 441 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 PLATP00750 562 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 APOA1P02647 267 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 CSN2P05814 226 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 SLC2A2P11168 524 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-212ENST00000556541 PSG2P11465 335 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 PRKACAP17612 351 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 SERPINA2P20848 420 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 NR4A2P43354 598 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 P2RY14Q15391 338 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 UBE2NLQ5JXB2 153 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 Q6P435 159 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 SLC36A1Q7Z2H8 476 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 KRTAP1-3Q8IUG1 177 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 ZNF561Q8N587 486 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 TMEM104Q8NE00 496 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 OR56B1Q8NGI3 324 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 LGALS14Q8TCE9 139 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 MED30Q96HR3 178 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 WDFY2Q96P53 400 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 GAL3ST1Q99999 423 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 LPAR5Q9H1C0 372 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 WDR13Q9H1Z4 485 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 NCOR1P1Q9H4R4 102 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 ZNF665Q9H7R5 613 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 ELL3Q9HB65 397 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-212ENST00000556541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.42□□□□□ -0.9
FOXN3-212ENST00000556541 DCAF16Q9NXF7 216 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 TREM2Q9NZC2 230 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 HSF4Q9ULV5 492 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 ST3GAL6Q9Y274 331 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 POLQO75417 2590 aa9.42□□□□□ -0.9
FOXN3-212ENST00000556541 DSCAML1Q8TD84 2053 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 IGKV1D-17A0A075B6S4 117 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 IGHV3-64DA0A0J9YX35 117 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 NKX6-3A6NJ46 265 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 LYNX1G3V0Z9 82 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 WNT9BO14905 357 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 SIGLEC5O15389 551 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 PPIHO43447 177 aaKnown RBP9.41□□□□□ -0.9
FOXN3-212ENST00000556541 CA11O75493 328 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 CRTAPO75718 401 aaPredicted RBP9.41□□□□□ -0.9
FOXN3-212ENST00000556541 LY6HO94772 140 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 HAND1O96004 215 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 LYNX1P0DP58 116 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 SNRPBP14678 240 aaKnown RBP9.41□□□□□ -0.9
FOXN3-212ENST00000556541 PRDX2P32119 198 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 CD80P33681 288 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 MNDAP41218 407 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 NPY4RP50391 375 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 ART1P52961 327 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 CLDN12P56749 244 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 CLEC12BQ2HXU8 276 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 PPP1R35Q8TAP8 253 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 SLC25A38Q96DW6 304 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 C1orf159Q96HA4 380 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 ZNF488Q96MN9 340 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 TMEM246Q9BRR3 403 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 RHBDL2Q9NX52 303 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 PTTG2Q9NZH5 202 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 ADAM30Q9UKF2 790 aa9.41□□□□□ -0.9
FOXN3-212ENST00000556541 C2CD3Q4AC94 2353 aa9.4□□□□□ -0.9
FOXN3-212ENST00000556541 A0A096LNT2 108 aa9.4□□□□□ -0.9
FOXN3-212ENST00000556541 SMIM30A4D0T7 59 aa9.4□□□□□ -0.9
FOXN3-212ENST00000556541 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.9
FOXN3-212ENST00000556541 A8MXK9 166 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms