RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 HAND1O96004 215 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 PRR23D2P0DMB1 279 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-219ENST00000556432 MPZP25189 248 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 PPP1R8Q12972 351 aaKnown RBP10.97□□□□□ -0.65
ACTN1-219ENST00000556432 IL24Q13007 206 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 HNF4GQ14541 408 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 ZNF829Q3KNS6 432 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-219ENST00000556432 SLC35E3Q7Z769 313 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 EMG1Q92979 244 aaKnown RBP10.97□□□□□ -0.65
ACTN1-219ENST00000556432 PKIBQ9C010 78 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 DCLRE1BQ9H816 532 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 SCOCQ9UIL1 159 aa10.97□□□□□ -0.65
ACTN1-219ENST00000556432 F8VVB4 439 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 F8VWA3 439 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 H3BN98 237 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 DLGAP1O14490 977 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 RPLP1P05386 114 aaKnown RBP10.96□□□□□ -0.65
ACTN1-219ENST00000556432 TMEM11P17152 192 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 HCCSP53701 268 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 PRRX1P54821 245 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 SNU13P55769 128 aaKnown RBP10.96□□□□□ -0.65
ACTN1-219ENST00000556432 KPNB1Q14974 876 aaKnown RBP10.96□□□□□ -0.65
ACTN1-219ENST00000556432 CXorf66Q5JRM2 361 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-219ENST00000556432 TEX38Q6PEX7 206 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 STPG2Q8N412 459 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 C5orf56Q8N8D9 126 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 OR52N4Q8NGI2 321 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 OR56B4Q8NH76 319 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 TOMM40LQ969M1 308 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 RPEQ96AT9 228 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 CITED4Q96RK1 184 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 MROQ9BYG7 248 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 TTTY10Q9BZA0 68 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 ZNF286AQ9HBT8 521 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 SLC7A11Q9UPY5 501 aa10.96□□□□□ -0.65
ACTN1-219ENST00000556432 UBE2J1Q9Y385 318 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-219ENST00000556432 DNAH7Q8WXX0 4024 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 MGST3O14880 152 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 ARPC2O15144 300 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 CCDC22O60826 627 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 IGLV1-47P01700 117 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 ALOX5APP20292 161 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 DUSP1P28562 367 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 HMGA2P52926 109 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 GYS2P54840 703 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 P2RX3P56373 397 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 MFGE8Q08431 387 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-219ENST00000556432 HLA-DRB5Q30154 266 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 HEPN1Q6WQI6 88 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 ISOC1Q96CN7 298 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 CADM1Q9BY67 442 aaKnown RBP10.95□□□□□ -0.66
ACTN1-219ENST00000556432 PCDHB16Q9NRJ7 776 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 MTCH1Q9NZJ7 389 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 IL36RNQ9UBH0 155 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 DNAJB9Q9UBS3 223 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 NUFIP1Q9UHK0 495 aaKnown RBP10.95□□□□□ -0.66
ACTN1-219ENST00000556432 IKZF2Q9UKS7 526 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 U3KQV3 271 aa10.95□□□□□ -0.66
ACTN1-219ENST00000556432 HUWE1Q7Z6Z7 4374 aaKnown RBP10.95□□□□□ -0.66
ACTN1-219ENST00000556432 DNAH1Q9P2D7 4330 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 LOC110117498-PIK3R3F6TDL0 507 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 PSPNO60542 156 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 MRPL3P09001 348 aaKnown RBP10.94□□□□□ -0.66
ACTN1-219ENST00000556432 FRMD6-AS1P0C7T7 363 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 RIDAP52758 137 aaKnown RBP10.94□□□□□ -0.66
ACTN1-219ENST00000556432 KIR2DS1Q14954 304 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 FAM27D1Q5T7N8 215 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 BCL2L15Q5TBC7 163 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 TMEM42Q69YG0 159 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 SLC25A26Q70HW3 274 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 ENTHD1Q8IYW4 607 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 OR4D6Q8NGJ1 314 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 HRASLS5Q96KN8 279 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 DGCR6LQ9BY27 220 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 PLEKHA1Q9HB21 404 aa10.94□□□□□ -0.66
ACTN1-219ENST00000556432 NKX1-2Q9UD57 310 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-219ENST00000556432 SAMHD1Q9Y3Z3 626 aaKnown RBP10.94□□□□□ -0.66
ACTN1-219ENST00000556432 SIRT4Q9Y6E7 314 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-219ENST00000556432 SORL1Q92673 2214 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 SIRPB1O00241 398 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 DYNC1I1O14576 645 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 PRODHO43272 600 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 FGF16O43320 207 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 JTBO76095 146 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 IGLV3-1P01715 115 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 TTRP02766 147 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 NFYBP25208 207 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 GDNFP39905 211 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 PTGFRP43088 359 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 OR3A1P47881 315 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 PNLIPRP3Q17RR3 467 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 DEGS2Q6QHC5 323 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 CPOQ8IVL8 374 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 DRAM1Q8N682 238 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 CMTM5Q96DZ9 223 aa10.93□□□□□ -0.66
ACTN1-219ENST00000556432 RNFT2Q96EX2 444 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms