RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SLC35E4Q6ICL7 350 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 FAM58AQ8N1B3 248 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 ZNF676Q8N7Q3 588 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 OR13C3Q8NGS6 347 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 OR13D1Q8NGV5 346 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 OR10AC1Q8NH08 325 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 OPALINQ96PE5 141 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 MYCBPQ99417 103 aaPredicted RBP11.21□□□□□ -0.61
PCNX4-209ENST00000555569 SLC29A1Q99808 456 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 ALG8Q9BVK2 526 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 S100A14Q9HCY8 104 aa11.21□□□□□ -0.61
PCNX4-209ENST00000555569 RBFOX1Q9NWB1 397 aaKnown RBP11.21□□□□□ -0.61
PCNX4-209ENST00000555569 TET2Q6N021 2002 aaPredicted RBP11.2□□□□□ -0.62
PCNX4-209ENST00000555569 hADV38S2A0JD32 116 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 FAM90A8PA6NJQ4 464 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 ARG1P05089 322 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 OCM2P0CE71 109 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 OCMP0CE72 109 aaPredicted RBP11.2□□□□□ -0.62
PCNX4-209ENST00000555569 IGHV1-8P0DP01 117 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 PRKACAP17612 351 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 GABRR1P24046 479 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 DUSP1P28562 367 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 GABRA5P31644 462 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 PDZK1IP1Q13113 114 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 ZNF146Q15072 292 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 GRK1Q15835 563 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 ZBTB49Q6ZSB9 765 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 LHFPL4Q7Z7J7 247 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 LHFPL3Q86UP9 236 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 SYS1Q8N2H4 156 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 PQLC1Q8N2U9 271 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 OR52N4Q8NGI2 321 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 OR51A4Q8NGJ6 313 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 RHOXF1Q8NHV9 184 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 RFT1Q96AA3 541 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 Q96MT0 163 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 RAB18Q9NP72 206 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 FBLN5Q9UBX5 448 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 GLS2Q9UI32 602 aa11.2□□□□□ -0.62
PCNX4-209ENST00000555569 TBL2Q9Y4P3 447 aaKnown RBP11.2□□□□□ -0.62
PCNX4-209ENST00000555569 VWFP04275 2813 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 LOC100130705A0A1B0GUX0 176 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 ODF3BA8MYP8 253 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 KCNAB3O43448 404 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 PSPNO60542 156 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 FADS2O95864 444 aaKnown RBP11.19□□□□□ -0.62
PCNX4-209ENST00000555569 MT-ND2P03891 347 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 CALCBP10092 127 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 SNU13P55769 128 aaKnown RBP11.19□□□□□ -0.62
PCNX4-209ENST00000555569 SPIN3Q5JUX0 258 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 CRIP3Q6Q6R5 217 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 TCF23Q7RTU1 214 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 TPRX1Q8N7U7 411 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 OR4S1Q8NGB4 309 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 OR4C13Q8NGP0 309 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 OR13C9Q8NGT0 318 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 PPP1R35Q8TAP8 253 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 FOXRED1Q96CU9 486 aaPredicted RBP11.19□□□□□ -0.62
PCNX4-209ENST00000555569 SPACA5Q96QH8 159 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 CHST6Q9GZX3 395 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 MMP27Q9H306 513 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 NEK6Q9HC98 313 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 AMBNQ9NP70 447 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 INPP5EQ9NRR6 644 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 MYRFQ9Y2G1 1151 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 LINC00312Q9Y6C7 94 aa11.19□□□□□ -0.62
PCNX4-209ENST00000555569 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 VGLL3A8MV65 326 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 EBAG9O00559 213 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 SH2D1BO14796 132 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 MGST3O14880 152 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 RPSAP08865 295 aaKnown RBP11.18□□□□□ -0.62
PCNX4-209ENST00000555569 KIR2DS4P43632 304 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 RAB40BQ12829 278 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 MRPL28Q13084 256 aaKnown RBP11.18□□□□□ -0.62
PCNX4-209ENST00000555569 FAM189A2Q15884 450 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 ZNF626Q68DY1 528 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 RNF144BQ7Z419 303 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 DYNAPQ8N1N2 210 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 OR11H6Q8NGC7 330 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 PIFOQ8TCI5 191 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 MALSU1Q96EH3 234 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 ZNF649Q9BS31 505 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 ZCCHC4Q9H5U6 513 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 RANBP3Q9H6Z4 567 aaPredicted RBP11.18□□□□□ -0.62
PCNX4-209ENST00000555569 ISG20L2Q9H9L3 353 aaKnown RBP11.18□□□□□ -0.62
PCNX4-209ENST00000555569 HMG20AQ9NP66 347 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 EXOSC4Q9NPD3 245 aaKnown RBP11.18□□□□□ -0.62
PCNX4-209ENST00000555569 FAM118AQ9NWS6 357 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 ERVK13-1Q9NX77 482 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 GSTK1Q9Y2Q3 226 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 SESN1Q9Y6P5 492 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 CMYA5Q8N3K9 4069 aa11.18□□□□□ -0.62
PCNX4-209ENST00000555569 TMEM212A6NML5 194 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 SIRPB1O00241 398 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 KDM4BO94953 1096 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms