RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ABCG5Q9H222 651 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 MS4A5Q9H3V2 200 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 PCDHB16Q9NRJ7 776 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 M0QYG6 137 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 ZNF780AO75290 641 aaPredicted RBP8.62□□□□□ -1.03
NEK9-205ENST00000555405 GDNFP39905 211 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 GPR176Q14439 515 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 PAN3Q58A45 887 aaKnown RBP8.62□□□□□ -1.03
NEK9-205ENST00000555405 PLAC9Q5JTB6 97 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 AVPI1Q5T686 147 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 WDR82Q6UXN9 313 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 SPERTQ8NA61 448 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 COX4I2Q96KJ9 171 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 WDFY2Q96P53 400 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 CMSS1Q9BQ75 279 aaKnown RBP8.62□□□□□ -1.03
NEK9-205ENST00000555405 FN3KRPQ9HA64 309 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 IGLV3-9A0A075B6K5 115 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 UPK1BO75841 260 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 MT-ND4P03905 459 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 EGR1P18146 543 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 TRIM16LQ309B1 348 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 LYPD6Q86Y78 171 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 FAM222BQ8WU58 562 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 SDHCQ99643 169 aaPredicted RBP8.62□□□□□ -1.03
NEK9-205ENST00000555405 OR10A4Q9H209 315 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 LIME1Q9H400 295 aa8.62□□□□□ -1.03
NEK9-205ENST00000555405 B9A039 149 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 SSX4O60224 188 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 GYPAP02724 150 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 SELLP14151 372 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 PMELP40967 661 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 ETV6P41212 452 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 EDDM3BP56851 147 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 SCGB2B2Q4G0G5 96 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 OR11L1Q8NGX0 322 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 SULT4A1Q9BR01 284 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 ARHGAP32A7KAX9 2087 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 A6NNC1 897 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 MCRIP1C9JLW8 97 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 TNFRSF1AP19438 455 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 TUBG1P23258 451 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 RBM11P57052 281 aaKnown RBP8.61□□□□□ -1.03
NEK9-205ENST00000555405 DEFA1P59665 94 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 DEFA3P59666 94 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 MZT1Q08AG7 82 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 Q6ZSR3 168 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 SSX8Q7RTT4 187 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 TUBG2Q9NRH3 451 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 NOP16Q9Y3C1 178 aaKnown RBP8.61□□□□□ -1.03
NEK9-205ENST00000555405 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
NEK9-205ENST00000555405 ORC5O43913 435 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 PTBP3O95758 552 aaKnown RBP8.61□□□□□ -1.03
NEK9-205ENST00000555405 CHRM2P08172 466 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 RCVRNP35243 200 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 RFX2P48378 723 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 HCFC1P51610 2035 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 SEC61A1P61619 476 aaKnown RBP8.61□□□□□ -1.03
NEK9-205ENST00000555405 QRFPP83859 136 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 DYNC1I2Q13409 638 aaKnown RBP8.61□□□□□ -1.03
NEK9-205ENST00000555405 C3orf36Q3SXR2 165 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 AGAP6Q5VW22 663 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 C1orf174Q8IYL3 243 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 ZNRF1Q8ND25 227 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 TMEM185AQ8NFB2 350 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 PXT1Q8NFP0 134 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 CCL13Q99616 98 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 PECRQ9BY49 303 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 GCM1Q9NP62 436 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 GHRLQ9UBU3 117 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 METRNQ9UJH8 293 aa8.61□□□□□ -1.03
NEK9-205ENST00000555405 ANKRD17O75179 2603 aaKnown RBP8.6□□□□□ -1.03
NEK9-205ENST00000555405 FAM240BA0A1B0GVZ2 78 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 ALX3O95076 343 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 PLA2G2AP14555 144 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 HIST1H1DP16402 221 aaKnown RBP8.6□□□□□ -1.03
NEK9-205ENST00000555405 AGAP20933 346 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 TSPAN5P62079 268 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 FIP1L1Q6UN15 594 aaKnown RBP8.6□□□□□ -1.03
NEK9-205ENST00000555405 OR2W3Q7Z3T1 314 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 LYSMD2Q8IV50 215 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 C11orf53Q8IXP5 236 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 IL1F10Q8WWZ1 152 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 Q96M66 194 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 FAIMQ9NVQ4 179 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 ETAA1Q9NY74 926 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 RNF7Q9UBF6 113 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 ZDHHC8Q9ULC8 765 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 A0A1B0GVG6 124 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 WIPF3A6NGB9 483 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 SH2D1BO14796 132 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 LDLRAD4O15165 306 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 PPIHO43447 177 aaKnown RBP8.6□□□□□ -1.03
NEK9-205ENST00000555405 ICMTO60725 284 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 PMP2P02689 132 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 FUT3P21217 361 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 COL8A2P25067 703 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 FGF12P61328 243 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 IL24Q13007 206 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 RGS21Q2M5E4 152 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms