RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TPBGQ13641 420 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 PMVKQ15126 192 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 EXOC3L4Q17RC7 722 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 RGS21Q2M5E4 152 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 SYT6Q5T7P8 510 aaPredicted RBP3.1□□□□□ -1.91
VRK1-205ENST00000555402 FAM222AQ5U5X8 452 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 FAM173BQ6P4H8 233 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 HMGN2P46Q86SG4 172 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 ZNF101Q8IZC7 436 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 ORMDL3Q8N138 153 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 SLC25A29Q8N8R3 303 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 OR2Y1Q8NGV0 311 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 DOK4Q8TEW6 326 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 ADTRPQ96IZ2 230 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 METTL26Q96S19 204 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 RSPO3Q9BXY4 272 aaPredicted RBP3.1□□□□□ -1.91
VRK1-205ENST00000555402 PLEKHA1Q9HB21 404 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 TFR2Q9UP52 801 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 C2orf16Q68DN1 1984 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 USP42Q9H9J4 1324 aaKnown RBP3.1□□□□□ -1.91
VRK1-205ENST00000555402 ANKRD12Q6UB98 2062 aa3.1□□□□□ -1.91
VRK1-205ENST00000555402 SLC5A10A0PJK1 596 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 A8MWL6 223 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 RPL36A-HNRNPH2H7BZ11 118 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 ZNF593O00488 134 aaPredicted RBP3.09□□□□□ -1.91
VRK1-205ENST00000555402 TCAPO15273 167 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 TRAPPC3O43617 180 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 ADAP1O75689 374 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 CD28P10747 220 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 HLA-GP17693 338 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 MAGEA3P43357 314 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 STX4Q12846 297 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 IDNKQ5T6J7 187 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 AHSA2Q719I0 299 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 RNF182Q8N6D2 247 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 ZNF738Q8NE65 137 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 IFT81Q8WYA0 676 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 OR2M4Q96R27 311 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 PDCD1LG2Q9BQ51 273 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 MRPL20Q9BYC9 149 aaKnown RBP3.09□□□□□ -1.91
VRK1-205ENST00000555402 ZSCAN16Q9H4T2 348 aaPredicted RBP3.09□□□□□ -1.91
VRK1-205ENST00000555402 PLEKHF2Q9H8W4 249 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 ACOT13Q9NPJ3 140 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 C1orf109Q9NX04 203 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 RAB22AQ9UL26 194 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 S4R3C0 116 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 RAD50Q92878 1312 aa3.09□□□□□ -1.91
VRK1-205ENST00000555402 YEATS2Q9ULM3 1422 aa3.09□□□□□ -1.92
VRK1-205ENST00000555402 GOLGA6L10A6NI86 522 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 OR5F1O95221 314 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 KRT7P08729 469 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 HLA-DMAP28067 261 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 EVI2BP34910 448 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 CDKN2CP42773 168 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 MAGEA2P43356 314 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 OR12D2P58182 307 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 DSTNP60981 165 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 FUT5Q11128 374 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 BNIP2Q12982 314 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 STX5Q13190 355 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 BTN1A1Q13410 526 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 ZNHIT3Q15649 155 aaPredicted RBP3.08□□□□□ -1.92
VRK1-205ENST00000555402 UAP1Q16222 522 aaPredicted RBP3.08□□□□□ -1.92
VRK1-205ENST00000555402 ACTL10Q5JWF8 245 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 RESP18Q5W5W9 173 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 SLC25A34Q6PIV7 304 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 TMEM25Q86YD3 366 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 PDPNQ86YL7 162 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 PHF10Q8WUB8 498 aaKnown RBP3.08□□□□□ -1.92
VRK1-205ENST00000555402 DNAJB3Q8WWF6 145 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 VAT1Q99536 393 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 ZNF2Q9BSG1 426 aaPredicted RBP3.08□□□□□ -1.92
VRK1-205ENST00000555402 ZNF426Q9BUY5 554 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 API5Q9BZZ5 524 aaKnown RBP3.08□□□□□ -1.92
VRK1-205ENST00000555402 PORCNQ9H237 461 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 VCX3BQ9H321 246 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 DDIT4Q9NX09 232 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 USE1Q9NZ43 259 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 CYB5R1Q9UHQ9 305 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 PRO0628Q9UI54 55 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 ACOT9Q9Y305 439 aa3.08□□□□□ -1.92
VRK1-205ENST00000555402 GOLGA8IPA6NC78 632 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 CEACAM18A8MTB9 384 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 GOLGA8KD6RF30 607 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 GOLGA8MH3BSY2 632 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 DHRS3O75911 302 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 CDRT1O95170 752 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 GIMD1P0DJR0 217 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 PPP1R2P41236 205 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 RPL10AP62906 217 aaKnown RBP3.07□□□□□ -1.92
VRK1-205ENST00000555402 TOMM34Q15785 309 aaPredicted RBP3.07□□□□□ -1.92
VRK1-205ENST00000555402 LY6EQ16553 131 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 GOLGA7BQ2TAP0 167 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 TMEM31Q5JXX7 168 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 PPP1R2P3Q6NXS1 205 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 PRSS54Q6PEW0 395 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 UGT2A3Q6UWM9 527 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 CLEC19AQ6UXS0 136 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 SSX7Q7RTT5 188 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 BBS7Q8IWZ6 715 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms