RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TBX15Q96SF7 602 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 S100A13Q99584 98 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 C19orf24Q9BVV8 132 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 CCDC90BQ9GZT6 254 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 SIRPDQ9H106 197 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 Q9H521 79 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 RHOFQ9HBH0 211 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
SRP54-206ENST00000555317 FKBP14Q9NWM8 211 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 BLOC1S6Q9UL45 172 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 RAB26Q9ULW5 256 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 SIRT4Q9Y6E7 314 aaPredicted RBP9.98□□□□□ -0.81
SRP54-206ENST00000555317 F8VVB4 439 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 F8VWA3 439 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 K7N7A8 449 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 M0R1W7 72 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 SH2D1BO14796 132 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 RGS10O43665 173 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 VENTXO95231 258 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 CALCBP10092 127 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 BDKRB2P30411 391 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 NPBWR2P48146 333 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 BMXP51813 675 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 EDDM3BP56851 147 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 ACTG1P63261 375 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 BDH1Q02338 343 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 GUCA2AQ02747 115 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 BAMBIQ13145 260 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 RSU1Q15404 277 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 MED22Q15528 200 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 KRTAP24-1Q3LI83 254 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 DDI2Q5TDH0 399 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 RNLSQ5VYX0 342 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 NCR3LG1Q68D85 454 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 PDZD9Q8IXQ8 264 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 NANOGP1Q8N7R0 232 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 OR4M1Q8NGD0 313 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 OR13C5Q8NGS8 318 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 TNFAIP8L1Q8WVP5 186 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 CDCA4Q9BXL8 241 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 METTL8Q9H825 291 aaKnown RBP9.97□□□□□ -0.81
SRP54-206ENST00000555317 ZMAT3Q9HA38 289 aaKnown RBP9.97□□□□□ -0.81
SRP54-206ENST00000555317 TMEM138Q9NPI0 162 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 SIRT7Q9NRC8 400 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 GSTK1Q9Y2Q3 226 aa9.97□□□□□ -0.81
SRP54-206ENST00000555317 IGHV1-69DA0A0B4J2H0 117 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 TRBV5-5A0A0J9YX44 114 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 CENPVL3A0A0U1RRI6 287 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 KDM4BO94953 1096 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 IGHV1-69P01742 117 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 DUSP1P28562 367 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 ZNF93P35789 620 aaPredicted RBP9.96□□□□□ -0.82
SRP54-206ENST00000555317 EDDM3AQ14507 147 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 GRK1Q15835 563 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 RUSC1-AS1Q66K80 236 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 C1orf122Q6ZSJ8 110 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 BCL6BQ8N143 479 aaPredicted RBP9.96□□□□□ -0.82
SRP54-206ENST00000555317 OR8H2Q8N162 312 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 OR52N4Q8NGI2 321 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 OR51A2Q8NGJ7 313 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 SNX22Q96L94 193 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 PGLYRP3Q96LB9 341 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 OR14A2Q96R54 314 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 HMG20AQ9NP66 347 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 C19orf12Q9NSK7 152 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 FAM96BQ9Y3D0 163 aa9.96□□□□□ -0.82
SRP54-206ENST00000555317 FUOMA2VDF0 154 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 SIRPB1O00241 398 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 ALDOBP05062 364 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 CD1AP06126 327 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 HSMCR30P0CW71 290 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 ZNF44P15621 663 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 MTNR1BP49286 362 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 ZP1P60852 638 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 SLC35A2P78381 396 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 SCN1BQ07699 218 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 ZNF146Q15072 292 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 SPHARQ15513 63 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 RBM48Q5RL73 367 aaKnown RBP9.95□□□□□ -0.82
SRP54-206ENST00000555317 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
SRP54-206ENST00000555317 ZNF529Q6P280 563 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 PHC2Q8IXK0 858 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 MS4A15Q8N5U1 240 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 PXT1Q8NFP0 134 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 SPATA3Q8NHX4 192 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 UFD1Q92890 307 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 SLC25A28Q96A46 364 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 ZNF184Q99676 751 aaPredicted RBP9.95□□□□□ -0.82
SRP54-206ENST00000555317 CHST6Q9GZX3 395 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 METTL9Q9H1A3 318 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 PCDHB16Q9NRJ7 776 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 PAK1IP1Q9NWT1 392 aaPredicted RBP9.95□□□□□ -0.82
SRP54-206ENST00000555317 IL36RNQ9UBH0 155 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 RRP15Q9Y3B9 282 aaKnown RBP9.95□□□□□ -0.82
SRP54-206ENST00000555317 DSCAML1Q8TD84 2053 aa9.95□□□□□ -0.82
SRP54-206ENST00000555317 KIAA2026Q5HYC2 2103 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 IGKV1-12A0A0C4DH73 117 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 A0A1W2PPK0 400 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms