RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 VSTM2LQ96N03 204 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 GSX1Q9H4S2 264 aaPredicted RBP12.37□□□□□ -0.43
VTI1B-204ENST00000554659 AAMDCQ9H7C9 122 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 P4HTMQ9NXG6 502 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 IGHV1OR21-1A0A087WYE8 117 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 H3BMH7 237 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 ZNF737O75373 536 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 MBPP02686 304 aaPredicted RBP12.37□□□□□ -0.43
VTI1B-204ENST00000554659 HPXP02790 462 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 ZXDAP98168 799 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 Q6ZS52 159 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 BLNKQ8WV28 456 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 POM121Q96HA1 1249 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 TRAF4Q9BUZ4 470 aaPredicted RBP12.37□□□□□ -0.43
VTI1B-204ENST00000554659 CACNG5Q9UF02 275 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 NEURL1O76050 574 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 MPZL1O95297 269 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 HRASP01112 189 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 GALNSP34059 522 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 GNG4P50150 75 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 FAM78BQ5VT40 261 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 TMEM91Q6ZNR0 172 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 OR8B12Q8NGG6 310 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 TAAR9Q96RI9 348 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 RBFOX3A6NFN3 312 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 OR4C45A6NMZ5 311 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 FAM87AP0C7U9 286 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 PSG6Q00889 435 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 C19orf57Q0VDD7 668 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 FZD5Q13467 585 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 C10orf35Q96D05 121 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 CTGFP29279 349 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 PABPC1L2AQ5JQF8 200 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 WFDC8Q8IUA0 241 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 UBALD2Q8IYN6 164 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 OR5M9Q8NGP3 310 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 GNRHR2Q96P88 292 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 KCNK15Q9H427 330 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 ANXA10Q9UJ72 324 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 RNF24Q9Y225 148 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 SLC25A5P05141 298 aaKnown RBP12.36□□□□□ -0.43
VTI1B-204ENST00000554659 MYF5P13349 255 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 CAMPP49913 170 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 OR1C1Q15619 314 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 VMA21Q3ZAQ7 101 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
VTI1B-204ENST00000554659 ERVS71-1P61550 626 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 OR10C1Q96KK4 312 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 PAPPA2Q9BXP8 1791 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
VTI1B-204ENST00000554659 TNFSF15O95150 251 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 OPN1MWP04001 364 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 ARG1P05089 322 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 OPN1MW2P0DN77 364 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 OPN1MW3P0DN78 364 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 TMEM56Q96MV1 263 aa12.36□□□□□ -0.43
VTI1B-204ENST00000554659 RBP4P02753 201 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 TUSC1Q2TAM9 212 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 NEIL1Q96FI4 390 aaPredicted RBP12.35□□□□□ -0.43
VTI1B-204ENST00000554659 ESRP2Q9H6T0 727 aaKnown RBP12.35□□□□□ -0.43
VTI1B-204ENST00000554659 ZMIZ1Q9ULJ6 1067 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 C7orf66A4D0T2 115 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 IFITM3Q01628 133 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 HLA-BQ31612 363 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 NUBPLQ8TB37 319 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 GABRG3Q99928 467 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 PLA2G2FQ9BZM2 168 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 SLC25A22Q9H936 323 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 KNTC1P50748 2209 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 TRGV5A0A0B4J1U4 118 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 OR5B21A6NL26 309 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 M0QZ24 198 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 ZNF207O43670 478 aaKnown RBP12.35□□□□□ -0.43
VTI1B-204ENST00000554659 KIR2DS2P43631 304 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
VTI1B-204ENST00000554659 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
VTI1B-204ENST00000554659 CD226Q15762 336 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 AWAT1Q58HT5 328 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 TMEM147Q9BVK8 224 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 SCN1AP35498 2009 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 ZNF250P15622 560 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 PPOXP50336 477 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 B2MP61769 119 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 GAMTQ14353 236 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
VTI1B-204ENST00000554659 DUXBA0A1W2PPF3 345 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 TCRBV16S1A1N1A0A5B0 115 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 FGF2P09038 288 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 CA6P23280 308 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
VTI1B-204ENST00000554659 STARD10Q9Y365 291 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 TNFRSF1AP19438 455 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 SRD5A2P31213 254 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 LYRM7Q5U5X0 104 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 OR10G4Q8NGN3 311 aa12.34□□□□□ -0.43
VTI1B-204ENST00000554659 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms