RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 MTCP1P56278 107 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 ERVFRD-1P60508 538 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 COL10A1Q03692 680 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 MEF2CQ06413 473 aaPredicted RBP8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZNF146Q15072 292 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 TAF9Q16594 264 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 SPIN3Q5JUX0 258 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 LHFPL3Q86UP9 236 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 C11orf42Q8N5U0 333 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZNF676Q8N7Q3 588 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 ASCC1Q8N9N2 400 aaKnown RBP8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 BEND2Q8NDZ0 799 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR13C3Q8NGS6 347 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 APH1BQ8WW43 257 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 EMG1Q92979 244 aaKnown RBP8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 SNX22Q96L94 193 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 OPALINQ96PE5 141 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 COMMD4Q9H0A8 199 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 FGF20Q9NP95 211 aaPredicted RBP8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 TNFRSF19Q9NS68 423 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 AASSQ9UDR5 926 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 MYRFQ9Y2G1 1151 aa8.49□□□□□ -1.05
PTCD2P1-201ENST00000554393 IRGMA1A4Y4 181 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 C17orf98A8MV24 154 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 ANGPTL7O43827 346 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 WBP4O75554 376 aaKnown RBP8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 BAG2O95816 211 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 HAND1O96004 215 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 RPLP1P05386 114 aaKnown RBP8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OCM2P0CE71 109 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OCMP0CE72 109 aaPredicted RBP8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OMGP23515 440 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 POU3F4P49335 361 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 GBX2P52951 348 aaPredicted RBP8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 DLX1P56177 255 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 DLX6P56179 175 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 PDZK1IP1Q13113 114 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZNF273Q14593 569 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 PDLIM3Q53GG5 364 aaPredicted RBP8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OLFML2AQ68BL7 652 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 GDPD3Q7L5L3 318 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 SAXO1Q8IYX7 474 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 FAM58AQ8N1B3 248 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 BATF2Q8N1L9 274 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 PNKDQ8N490 385 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 PARP16Q8N5Y8 322 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 PACRGLQ8N7B6 248 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR4M1Q8NGD0 313 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR51A4Q8NGJ6 313 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR52I1Q8NGK6 324 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR5D14Q8NGL3 314 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR10AC1Q8NH08 325 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 WFDC12Q8WWY7 111 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 MEGF9Q9H1U4 602 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZCCHC4Q9H5U6 513 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 ISG20L2Q9H9L3 353 aaKnown RBP8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 AMBNQ9NP70 447 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 GLS2Q9UI32 602 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 TRRAPQ9Y4A5 3859 aa8.48□□□□□ -1.05
PTCD2P1-201ENST00000554393 A0A1W2PRD5 423 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 A0A1W2PRF3 423 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 A0A1W2PRM7 423 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 hADV38S2A0JD32 116 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 TMEM82A0PJX8 343 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 SULT1B1O43704 296 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 KDM4BO94953 1096 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZFPL1O95159 310 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 LIMS3P0CW19 117 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 LIMS4P0CW20 117 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZNF728P0DKX0 622 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 CCL3L1P16619 93 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 BCL3P20749 454 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 DCKP27707 260 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 PEX2P28328 305 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 TGFBR2P37173 567 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 NPBWR2P48146 333 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 CCDC58Q4VC31 144 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZNF691Q5VV52 312 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 TTC23Q5W5X9 447 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 DHRS7BQ6IAN0 325 aaPredicted RBP8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 C17orf107Q6ZR85 190 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 SERPINA12Q8IW75 414 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 ZSCAN4Q8NAM6 433 aaPredicted RBP8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR13C9Q8NGT0 318 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 OR5AK2Q8NH90 309 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 PPP1R35Q8TAP8 253 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 RPS4Y2Q8TD47 263 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 TAF15Q92804 592 aaKnown RBP eCLIP8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 CPNE2Q96FN4 548 aaPredicted RBP8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 C16orf95Q9H693 158 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 HMG20AQ9NP66 347 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 RBFOX1Q9NWB1 397 aaKnown RBP8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 PCDHGB5Q9Y5G0 923 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 LINC00312Q9Y6C7 94 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 KIAA2026Q5HYC2 2103 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 WNK1Q9H4A3 2382 aa8.47□□□□□ -1.05
PTCD2P1-201ENST00000554393 FAM90A8PA6NJQ4 464 aa8.46□□□□□ -1.06
PTCD2P1-201ENST00000554393 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms