RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 N6AMT1Q9Y5N5 214 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 COMMD3-BMI1R4GMX3 469 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 U3KQK5 164 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 COL7A1Q02388 2944 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DNAH11Q96DT5 4516 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 IGKV1-27A0A075B6S5 117 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 IGLV5-52A0A0A0MRZ9 124 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DHRS12A0PJE2 317 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 FAM172BPA6NC97 362 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 GGT3PA6NGU5 568 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 RFPL4AA6NLU0 287 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 LRRC30A6NM36 301 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR2AT4A6NND4 320 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF850A8MQ14 1090 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 RFPL4AL1F8VTS6 287 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 CXCR6O00574 342 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ARPC3O15145 178 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 MAGEB4O15481 346 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 NDUFB3O43676 98 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 NDUFA2O43678 99 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 AHCYL1O43865 530 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ENTPD5O75356 428 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 MTRF1O75570 445 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF682O95780 498 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SERPINA1P01009 418 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 IGLV3-1P01715 115 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 PIPP12273 146 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 MUC1P15941 1255 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 GRK5P34947 590 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 GABRA2P47869 451 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 GSSP48637 474 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 CENPAP49450 140 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SLC25A1P53007 311 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 HCCSP53701 268 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 CAV3P56539 151 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF121P58317 390 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 STX1BP61266 288 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 EMX1Q04741 257 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ACSM1Q08AH1 577 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 PRDX4Q13162 271 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SSX2Q16385 188 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 MICBQ29980 383 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DEFB136Q30KP8 78 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ANKDD1AQ495B1 522 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF770Q6IQ21 691 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 UNQ6126/PRO20091Q6UXV3 157 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF730Q6ZMV8 503 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DPY19L2P2Q6ZN68 376 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ACP7Q6ZNF0 438 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 MRPL21Q7Z2W9 205 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 HDDC2Q7Z4H3 204 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DCXRQ7Z4W1 244 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 RNF113BQ8IZP6 322 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SLC37A3Q8NCC5 494 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR9Q2Q8NGE9 314 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR8J3Q8NGG0 315 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR51G2Q8NGK0 314 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR5L1Q8NGL2 311 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR4P4Q8NGL7 312 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR4C13Q8NGP0 309 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR5K1Q8NHB7 308 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR2T6Q8NHC8 308 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 FNDC8Q8TC99 324 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SPRYD4Q8WW59 207 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SLAMF6Q96DU3 332 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SDSLQ96GA7 329 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 REEP6Q96HR9 211 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 COG8Q96MW5 612 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ELAC2Q9BQ52 826 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 BTBD10Q9BSF8 475 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ABHD6Q9BV23 337 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 NMNAT2Q9BZQ4 307 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 POLR2J2Q9GZM3 115 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 POLR2J3Q9H1A7 115 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 OR51I2Q9H344 312 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 METTL8Q9H825 291 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 MED20Q9H944 212 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 EDA2RQ9HAV5 297 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 CACYBPQ9HB71 228 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 SAR1AQ9NR31 198 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 GPR173Q9NS66 373 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DNAJC27Q9NZQ0 273 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 STX18Q9P2W9 335 aaKnown RBP2.45□□□□□ -2.02
SLIRP-202ENST00000553981 NLKQ9UBE8 527 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 TAGLN3Q9UI15 199 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 HILPDAQ9Y5L2 63 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 ENPP4Q9Y6X5 453 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 FAT2Q9NYQ8 4349 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DNAH6Q9C0G6 4158 aa2.45□□□□□ -2.02
SLIRP-202ENST00000553981 DNAH17Q9UFH2 4485 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 HECTD4Q9Y4D8 3996 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 A0A1W2PQ09 198 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 A0A1W2PRQ8 180 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 TCRBV4S1A1TA0A5B7 111 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 GMNCA6NCL1 334 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 A6NIN4 97 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 FAM183AA6NL82 134 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms