RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TMEM204Q9BSN7 226 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 TM2D1Q9BX74 207 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 SELENOIQ9C0D9 397 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 LPAR5Q9H1C0 372 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 BANF2Q9H503 90 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 ZSCAN5BA6NJL1 495 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 A6NLC8 198 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 B9A039 149 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 E7EQL1 145 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 F5H5P2 479 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 H0YL77 283 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 M0R233 179 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 AKR7A2O43488 359 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 NDUFS7O75251 213 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 UPK1BO75841 260 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 GRPP07492 148 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 ACAA1P09110 424 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-208ENST00000553868 SRD5A1P18405 259 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 CDKN1AP38936 164 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 INPP1P49441 399 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 PLA2G7Q13093 441 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 ZNF154Q13106 437 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 ZNF672Q499Z4 452 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-208ENST00000553868 HACD4Q5VWC8 232 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 TRIQKQ629K1 86 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 ELP2Q6IA86 826 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 FBXL14Q8N1E6 418 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 Q8N402 240 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 SCCPDHQ8NBX0 429 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 TMEM104Q8NE00 496 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 Q8NFD4 153 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 OR51T1Q8NGJ9 327 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 OR10K1Q8NGX5 313 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 AQP3Q92482 292 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 SLAMF9Q96A28 289 aa12.21□□□□□ -0.45
SHMT2-208ENST00000553868 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.45
SHMT2-208ENST00000553868 MALRD1Q5VYJ5 2156 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 TRAV18A0A075B6X5 111 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 IGKV1-12A0A0C4DH73 117 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 ISPDA4D126 451 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A10PA6NDY2 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A18PA6NE21 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A16PA6NEW6 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A20PA6NIJ5 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A8PA6NJQ4 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A7PA6NKC0 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A22PA8MWA6 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A12PA8MX19 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A5PA8MXJ8 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A23PA8MXZ1 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 SPRY3O43610 288 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 GSTZ1O43708 216 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-208ENST00000553868 IGKV1D-12P01611 117 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 ADH4P08319 380 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A15PP0C7V4 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A13PP0C7W8 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A14PP0C7W9 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM90A24PP0C7X0 464 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 VEGFCP49767 419 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 DEFA1P59665 94 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 DEFA3P59666 94 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FGF12P61328 243 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 DEFA6Q01524 100 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 TMEM249Q2WGJ8 235 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FIP1L1Q6UN15 594 aaKnown RBP12.2□□□□□ -0.46
SHMT2-208ENST00000553868 LINC00596Q86U02 117 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 IZUMO1Q8IYV9 350 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAM89BQ8N5H3 189 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-208ENST00000553868 DTX3Q8N9I9 347 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 CHST4Q8NCG5 386 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 OR10R2Q8NGX6 335 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 Q96M66 194 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 GAL3ST1Q99999 423 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 TLNRD1Q9H1K6 362 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 MS4A5Q9H3V2 200 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FN3KRPQ9HA64 309 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 DYNLRB1Q9NP97 96 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 ABCB10Q9NRK6 738 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 FAIMQ9NVQ4 179 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 LPAR3Q9UBY5 353 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 IL19Q9UHD0 177 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 PRR14LQ5THK1 2151 aa12.2□□□□□ -0.46
SHMT2-208ENST00000553868 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
SHMT2-208ENST00000553868 A0A1W2PP11 408 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 RAB27BO00194 218 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 SULT1C2O00338 296 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
SHMT2-208ENST00000553868 SYNGR1O43759 233 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
SHMT2-208ENST00000553868 IGHV4-39P01824 125 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 GSTP1P09211 210 aaKnown RBP12.19□□□□□ -0.46
SHMT2-208ENST00000553868 BCL3P20749 454 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 SNRPD2P62316 118 aaKnown RBP12.19□□□□□ -0.46
SHMT2-208ENST00000553868 TNFAIP6P98066 277 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-208ENST00000553868 SCN1BQ07699 218 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 MADCAM1Q13477 382 aa12.19□□□□□ -0.46
SHMT2-208ENST00000553868 PCGF3Q3KNV8 242 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms