RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 OR13C9Q8NGT0 318 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 OR51E1Q8TCB6 317 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 PLEKHA2Q9HB19 425 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 PNRC2Q9NPJ4 139 aaKnown RBP10.7□□□□□ -0.7
SHMT2-207ENST00000553837 CHTOPQ9Y3Y2 248 aaKnown RBP10.7□□□□□ -0.7
SHMT2-207ENST00000553837 FREM2Q5SZK8 3169 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 E9PLN8 166 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 RER1O15258 196 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 TDGF1P13385 188 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-207ENST00000553837 HSD11B1P28845 292 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 NKX6-1P78426 367 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-207ENST00000553837 SPEM2Q0P670 501 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 UBE2V2Q15819 145 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 HIST3H2BBQ8N257 126 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 ADPRHL1Q8NDY3 354 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 LFNGQ8NES3 379 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 NTNG2Q96CW9 530 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 SPACA5Q96QH8 159 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 PRRX2Q99811 253 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 SUCNR1Q9BXA5 334 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 SMIM3Q9BZL3 60 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 PROK2Q9HC23 129 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 ZDHHC8Q9ULC8 765 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 FBXO7Q9Y3I1 522 aa10.7□□□□□ -0.7
SHMT2-207ENST00000553837 A0A087WWC5 75 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 OR5H15A6NDH6 313 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 OR5H1A6NKK0 313 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 G3V3Y1 287 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BKO60814 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 DEDDO75618 318 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 IGHG1P01857 330 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 CFIP05156 583 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BJP06899 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 METTL15P1P0C7V9 234 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 VSIG8P0DPA2 414 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 PI3P19957 117 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 FGF7P21781 194 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BOP23527 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BBP33778 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BDP58876 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BCP62807 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST3H3Q16695 136 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST2H2BEQ16778 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 IAH1Q2TAA2 248 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-207ENST00000553837 FAM219AQ8IW50 185 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 SLC22A24Q8N4F4 322 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 OR13D1Q8NGV5 346 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 OR5H2Q8NGV7 314 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BHQ93079 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF385AQ96PM9 386 aaKnown RBP10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BNQ99877 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H2BMQ99879 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 PRO1933Q9H354 126 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 C19orf25Q9UFG5 118 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-207ENST00000553837 ANAPC10Q9UM13 185 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 MMP24Q9Y5R2 645 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 LOC102723996A0A087X1L8 192 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 IGHV1-45A0A0A0MS14 117 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF726A6NNF4 738 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF724A8MTY0 619 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 KLF7O75840 302 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-207ENST00000553837 PRH1P02810 166 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 GSTP1P09211 210 aaKnown RBP10.69□□□□□ -0.7
SHMT2-207ENST00000553837 QDPRP09417 244 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 CCL3P10147 92 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF17P17021 662 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 PHYHD1Q5SRE7 291 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 KLHL24Q6TFL4 600 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 DTX1Q86Y01 620 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 OR8B12Q8NGG6 310 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 SLC25A43Q8WUT9 341 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-207ENST00000553837 IMMP1LQ96LU5 166 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 OXGR1Q96P68 337 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 C1orf123Q9NWV4 160 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 FBLN5Q9UBX5 448 aa10.69□□□□□ -0.7
SHMT2-207ENST00000553837 CCDC187A0A096LP49 1063 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 AQP7P3A6NL99 342 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 SOD3P08294 240 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 COX6A1P12074 109 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF121P58317 390 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-207ENST00000553837 KHDC3LQ587J8 217 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 DMRTC1Q5HYR2 192 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF101Q8IZC7 436 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 OR5AS1Q8N127 324 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 HSD17B11Q8NBQ5 300 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 RHBDD1Q8TEB9 315 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 NAT6Q93015 286 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 GINS3Q9BRX5 216 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 TUBD1Q9UJT1 453 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 SDK2Q58EX2 2172 aa10.68□□□□□ -0.7
SHMT2-207ENST00000553837 IGHV3-15A0A0B4J1V0 119 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 GLRA1P23415 457 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 LMO1P25800 156 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 TAGLN2P37802 199 aaKnown RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 RBMXP38159 391 aaKnown RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 OR3A2P47893 321 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 ELOBQ15370 118 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms