RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 BDP1A6H8Y1 2624 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 KIF15Q9NS87 1388 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 SOGA1O94964 1423 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ZNF518AQ6AHZ1 1483 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 FANCD2Q9BXW9 1451 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 PIEZO1Q92508 2521 aa1.56□□□□□ -2.16
VRK1-202ENST00000553683 ZFHX4Q86UP3 3567 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 ZNF292O60281 2723 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 A0A1B0GVL5 298 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 A8MUU9 505 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 H3BQF6 201 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 PSMD12O00232 456 aaPredicted RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 RFXANKO14593 260 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 RAB29O14966 203 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 ZBTB5O15062 677 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 DLEU1O43261 78 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 XRCC2O43543 280 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 TIMM8AO60220 97 aaPredicted RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 UTS2O95399 124 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 TSPAN13O95857 204 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 TSPAN12O95859 305 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CCNE2O96020 404 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CYB5R3P00387 301 aaPredicted RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 IFNA4P05014 189 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 IL4P05112 153 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 FABP3P05413 133 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 SERPIND1P05546 499 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CDK1P06493 297 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 COX4I1P13073 169 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 NCK1P16333 377 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 HLA-GP17693 338 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 GZMHP20718 246 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 STOMP27105 288 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CD82P27701 267 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CCR7P32248 378 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CA5AP35218 305 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 RFX3P48380 749 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 IDH2P48735 452 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 SRP9P49458 86 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 EIF2B2P49770 351 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 RANP62826 216 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 PITPNAQ00169 270 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 BST2Q10589 180 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 SLC39A6Q13433 755 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 MED21Q13503 144 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 KRR1Q13601 381 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 CLINT1Q14677 625 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 TMED2Q15363 201 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 TNXAQ16473 311 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 SLC36A2Q495M3 483 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 ACSBG2Q5FVE4 666 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 C6orf226Q5I0X4 101 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 NIPAL1Q6NVV3 410 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 DHRS4L2Q6PKH6 230 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 FUNDC1Q8IVP5 155 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 IFT20Q8IY31 132 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CMTM8Q8IZV2 173 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 ZFP82Q8N141 532 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 GABRG1Q8N1C3 465 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CLDN22Q8N7P3 220 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 C8orf31Q8N9H6 132 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 LRRC75AQ8NAA5 344 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 HSD17B11Q8NBQ5 300 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 FBXO36Q8NEA4 188 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 B3GNT7Q8NFL0 401 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 OR10W1Q8NGF6 305 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 OR9G4Q8NGQ1 327 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 OR11L1Q8NGX0 322 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 COQ8AQ8NI60 647 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 RNASE11Q8TAA1 199 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 TMEM239Q8WW34 195 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 RTN4IP1Q8WWV3 396 aaPredicted RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 NAT6Q93015 286 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 PPWD1Q96BP3 646 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 FAM3DQ96BQ1 224 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 TESCQ96BS2 214 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 S100PBPQ96BU1 408 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 RNF170Q96K19 258 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 OR2V2Q96R30 315 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CAMK2N2Q96S95 79 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 STACQ99469 402 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 RSG1Q9BU20 258 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 C20orf24Q9BUV8 137 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 ZNF426Q9BUY5 554 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 GGACTQ9BVM4 153 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 TRABDQ9H4I3 376 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 ZC4H2Q9NQZ6 224 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 POLE4Q9NR33 117 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 PXMP2Q9NR77 195 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 BABAM2Q9NXR7 383 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 SLC2A8Q9NY64 477 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 USE1Q9NZ43 259 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 PTTG3PQ9NZH4 202 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CCDC59Q9P031 241 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 STOML2Q9UJZ1 356 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 NXT1Q9UKK6 140 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 ASB4Q9Y574 426 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 PEX16Q9Y5Y5 336 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 SCAF11Q99590 1463 aaKnown RBP1.55□□□□□ -2.16
VRK1-202ENST00000553683 EPRSP07814 1512 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms