RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 DAPL1A0PJW8 107 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 ANKRD65E5RJM6 399 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 H3BSH0 61 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 DBTP11182 482 aaKnown RBP9.59□□□□□ -0.87
SRP54-203ENST00000553544 SAA4P35542 130 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 CAPGP40121 348 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 CCR9P51686 369 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 FUT6P51993 359 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 DLX1P56177 255 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
SRP54-203ENST00000553544 PRB3Q04118 309 aaPredicted RBP9.59□□□□□ -0.87
SRP54-203ENST00000553544 ZNF91Q05481 1191 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 ZNF691Q5VV52 312 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 TMEM244Q5VVB8 128 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 NCR3LG1Q68D85 454 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 ZNF561Q8N587 486 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 TMEM185AQ8NFB2 350 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 LGALS12Q96DT0 336 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 ZNF649Q9BS31 505 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 MMP28Q9H239 520 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 RANBP3Q9H6Z4 567 aaPredicted RBP9.59□□□□□ -0.87
SRP54-203ENST00000553544 PLEKHA1Q9HB21 404 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 CHCHD3Q9NX63 227 aaKnown RBP9.59□□□□□ -0.87
SRP54-203ENST00000553544 MTCH1Q9NZJ7 389 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 SLC7A11Q9UPY5 501 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 IGKV1-9A0A0C4DH69 117 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 FAM230AA0A1W2PPH8 454 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 F8VVB4 439 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 F8VWA3 439 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 FBXO24O75426 580 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 GATBO75879 557 aaKnown RBP9.58□□□□□ -0.88
SRP54-203ENST00000553544 NXPH2O95156 264 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 SERPINA3P01011 423 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 IGHA1P01876 353 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 MYL12AP19105 171 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 CEBPDP49716 269 aaPredicted RBP9.58□□□□□ -0.88
SRP54-203ENST00000553544 LY6EQ16553 131 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 HCP5Q6MZN7 132 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 SYS1Q8N2H4 156 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 PNKDQ8N490 385 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 C11orf42Q8N5U0 333 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 DNAAF1Q8NEP3 725 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 TRMT10AQ8TBZ6 339 aaKnown RBP9.58□□□□□ -0.88
SRP54-203ENST00000553544 PP6455Q8WZ26 134 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 ADAT3Q96EY9 351 aaPredicted RBP9.58□□□□□ -0.88
SRP54-203ENST00000553544 PELI1Q96FA3 418 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 WWC2-AS2Q96NR7 200 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 NPFFR1Q9GZQ6 430 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 METTL8Q9H825 291 aaKnown RBP9.58□□□□□ -0.88
SRP54-203ENST00000553544 C19orf12Q9NSK7 152 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 MRPS18AQ9NVS2 196 aaKnown RBP9.58□□□□□ -0.88
SRP54-203ENST00000553544 MYRFQ9Y2G1 1151 aa9.58□□□□□ -0.88
SRP54-203ENST00000553544 SF3B6Q9Y3B4 125 aaKnown RBP9.58□□□□□ -0.88
SRP54-203ENST00000553544 A0A1W2PQ09 198 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 OR4C45A6NMZ5 311 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 SLC1A7O00341 560 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 TK1P04183 234 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 HTR1AP08908 422 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 CD28P10747 220 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 DCKP27707 260 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 KLRD1Q13241 179 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 ALKBH1Q13686 389 aaKnown RBP9.57□□□□□ -0.88
SRP54-203ENST00000553544 BLMHQ13867 455 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 GALEQ14376 348 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 AANATQ16613 207 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 TMEM200BQ69YZ2 307 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 C11orf87Q6NUJ2 197 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 UTS2BQ765I0 119 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 LHFPL3Q86UP9 236 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 NDUFA11Q86Y39 141 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 BATF2Q8N1L9 274 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 WFDC9Q8NEX5 89 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 BORCS8Q96FH0 119 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 C4orf36Q96KX1 117 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 OCSTAMPQ9BR26 566 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 MEGF9Q9H1U4 602 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 SEBOXQ9HB31 216 aaPredicted RBP9.57□□□□□ -0.88
SRP54-203ENST00000553544 NEK6Q9HC98 313 aa9.57□□□□□ -0.88
SRP54-203ENST00000553544 DNAH3Q8TD57 4116 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 J3QLW9 94 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 K7EIL1 84 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 K7N7A8 449 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 ZNF737O75373 536 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 CCDC159P0C7I6 412 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 ZNF19P17023 458 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 ATF1P18846 271 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 CD33P20138 364 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 RBP2P50120 134 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 CAPZA1P52907 286 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 RPL31P62899 125 aaKnown RBP9.56□□□□□ -0.88
SRP54-203ENST00000553544 ADARB1P78563 741 aaKnown RBP9.56□□□□□ -0.88
SRP54-203ENST00000553544 RIPK1Q13546 671 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 CNN3Q15417 329 aaKnown RBP9.56□□□□□ -0.88
SRP54-203ENST00000553544 LRRC75BQ2VPJ9 315 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 TMPRSS11AQ6ZMR5 421 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 SLC25A26Q70HW3 274 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 FAM185AQ8N0U4 392 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 OR51A4Q8NGJ6 313 aa9.56□□□□□ -0.88
SRP54-203ENST00000553544 OR5D13Q8NGL4 314 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms