RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ACSM3Q53FZ2 586 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 ZFAND2BQ8WV99 257 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 MUL1Q969V5 352 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 DCTN5Q9BTE1 182 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 SIRPDQ9H106 197 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 OR14J1Q9UGF5 321 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 MAB21L2Q9Y586 359 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 TRBV5-7A0A0A0MS05 114 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 IGKV1-9A0A0C4DH69 117 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 A0A1W2PPK0 400 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 GPR37O15354 613 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 SMIM18P0DKX4 95 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 RAB3AP20336 220 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 CEBPDP49716 269 aaPredicted RBP19.46■□□□□ 0.71
TDP1-205ENST00000553527 PRB3Q04118 309 aaPredicted RBP19.46■□□□□ 0.71
TDP1-205ENST00000553527 INSL4Q14641 139 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 SMIM21Q3B7S5 101 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 C11orf91Q3C1V1 193 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 SYT6Q5T7P8 510 aaPredicted RBP19.46■□□□□ 0.71
TDP1-205ENST00000553527 DNAAF1Q8NEP3 725 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 FAM216AQ8WUB2 273 aa19.46■□□□□ 0.71
TDP1-205ENST00000553527 IGKV1-27A0A075B6S5 117 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 CENPVL3A0A0U1RRI6 287 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 TRIM64CA6NLI5 447 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 HCKP08631 526 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 FSTP19883 344 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 PRDX2P32119 198 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 GP2P55259 537 aaKnown RBP19.45■□□□□ 0.7
TDP1-205ENST00000553527 UBA52P62987 128 aaKnown RBP19.45■□□□□ 0.7
TDP1-205ENST00000553527 ASPHD2Q6ICH7 369 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 LHFPL2Q6ZUX7 228 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 VMO1Q7Z5L0 202 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 CEACAM19Q7Z692 300 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 CD177Q8N6Q3 437 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 LY6G5BQ8NDX9 201 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 ZDHHC16Q969W1 377 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 SLAMF9Q96A28 289 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 ORAI1Q96D31 301 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 NOX4Q9NPH5 578 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 ZNF222Q9UK12 451 aa19.45■□□□□ 0.7
TDP1-205ENST00000553527 SF3B6Q9Y3B4 125 aaKnown RBP19.45■□□□□ 0.7
TDP1-205ENST00000553527 A0A1W2PQ09 198 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 MAGEA13PA6NCF6 341 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 DNAJC9-AS1A6NH13 148 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 ALX3O95076 343 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 RBP2P50120 134 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 ATP1B3P54709 279 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 PDCD1Q15116 288 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 DEFB112Q30KQ8 113 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 GCDHQ92947 438 aaPredicted RBP19.44■□□□□ 0.7
TDP1-205ENST00000553527 NRIP2Q9BQI9 281 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 MRPS26Q9BYN8 205 aaKnown RBP19.44■□□□□ 0.7
TDP1-205ENST00000553527 PKIBQ9C010 78 aa19.44■□□□□ 0.7
TDP1-205ENST00000553527 STAB1Q9NY15 2570 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 MAGEB3O15480 346 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 NOS1APO75052 506 aaPredicted RBP19.43■□□□□ 0.7
TDP1-205ENST00000553527 SC5DO75845 299 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 MPZP25189 248 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 TGFBR2P37173 567 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 DLX1P56177 255 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 MTCP1P56278 107 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 IL24Q13007 206 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 ZNF529Q6P280 563 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 UNQ9370/PRO34162Q6UXP9 181 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 C9orf139Q6ZV77 190 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 SLC25A26Q70HW3 274 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 CMTM4Q8IZR5 234 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 OR51A2Q8NGJ7 313 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 CPNE2Q96FN4 548 aaPredicted RBP19.43■□□□□ 0.7
TDP1-205ENST00000553527 SIRT7Q9NRC8 400 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 TNFRSF19Q9NS68 423 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 MTCH1Q9NZJ7 389 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 KPTNQ9Y664 436 aa19.43■□□□□ 0.7
TDP1-205ENST00000553527 TRAV8-7A0A075B6U6 113 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 F8VVB4 439 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 F8VWA3 439 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 GABRPO00591 440 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 PIN1P1O15428 100 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 IGFBP3P17936 291 aaPredicted RBP19.42■□□□□ 0.7
TDP1-205ENST00000553527 CAV3P56539 151 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 FABP5Q01469 135 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 HSD17B12Q53GQ0 312 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 FAM27D1Q5T7N8 215 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 C12orf54Q6X4T0 127 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 SDSLQ96GA7 329 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 C1orf147Q96MC9 270 aaPredicted RBP19.42■□□□□ 0.7
TDP1-205ENST00000553527 SPACA5Q96QH8 159 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 TMEM138Q9NPI0 162 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 FOXJ3Q9UPW0 622 aa19.42■□□□□ 0.7
TDP1-205ENST00000553527 IGHV1-69DA0A0B4J2H0 117 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 GPX5O75715 221 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 IGHV1-69P01742 117 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 JUNBP17275 347 aaPredicted RBP19.41■□□□□ 0.7
TDP1-205ENST00000553527 PRTN3P24158 256 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 BDKRB2P30411 391 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 POU3F4P49335 361 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 TUSC1Q2TAM9 212 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 TMEM91Q6ZNR0 172 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 FAM185AQ8N0U4 392 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 RFT1Q96AA3 541 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms