RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ITPRIPQ8IWB1 547 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 CD302Q8IX05 232 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 SLC26A10Q8NG04 563 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 ACTL9Q8TC94 416 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 TNFRSF14Q92956 283 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 CCDC127Q96BQ5 260 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 DERL3Q96Q80 235 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 LLPHQ9BRT6 129 aaKnown RBP3□□□□□ -1.93
SCFD1-209ENST00000553280 MS4A8Q9BY19 250 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 MFSD1Q9H3U5 465 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 SND1-IT1Q9HBX3 110 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 SCML1Q9UN30 329 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 C15orf41Q9Y2V0 281 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 NUP153P49790 1475 aaKnown RBP2.99□□□□□ -1.93
SCFD1-209ENST00000553280 C7orf66A4D0T2 115 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 BTNL10A8MVZ5 291 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 FFAR1O14842 300 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 OR7C2O60412 319 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 CBR3O75828 277 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 OR2A4O95047 310 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 IL4P05112 153 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 RD3LP0DJH9 198 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF35P13682 527 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 NTF3P20783 257 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 TSPOP30536 169 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 MPIP34949 423 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 PLTPP55058 493 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 CCL23P55773 120 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 ATP5G2Q06055 141 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 MEF2CQ06413 473 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-209ENST00000553280 BTN1A1Q13410 526 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 SSX1Q16384 188 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 LAMTOR1Q6IAA8 161 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 PRSS54Q6PEW0 395 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 TPGS1Q6ZTW0 290 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 USP50Q70EL3 339 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-209ENST00000553280 NT5DC3Q86UY8 548 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 BOD1L2Q8IYS8 172 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 STK40Q8N2I9 435 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 TMEM105Q8N8V8 129 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF555Q8NEP9 628 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 FAM45AQ8TCE6 357 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 RNASEH2CQ8TDP1 164 aaKnown RBP2.99□□□□□ -1.93
SCFD1-209ENST00000553280 RTN4IP1Q8WWV3 396 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-209ENST00000553280 CCL17Q92583 94 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 FMC1Q96HJ9 113 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 OR2A7Q96R45 310 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 SUCNR1Q9BXA5 334 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 POMKQ9H5K3 350 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 C1orf109Q9NX04 203 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 S4R3C0 116 aa2.99□□□□□ -1.93
SCFD1-209ENST00000553280 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 A0A1W2PRG6 482 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 TMEM150BA6NC51 233 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 PGPA6NDG6 321 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 C9JQL5 133 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 GOLGA8RI6L899 631 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 GYG2O15488 501 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 COX7A2P2O60397 106 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 WISP3O95389 354 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-209ENST00000553280 LHBP01229 141 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 LIMS3P0CW19 117 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 LIMS4P0CW20 117 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 CD28P10747 220 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 M6PRP20645 277 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 PSMB9P28065 219 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 ACOT2P49753 483 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 SKP1P63208 163 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 ELOCQ15369 112 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 FAM183BPQ6ZVS7 135 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 OSR2Q8N2R0 312 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 ST20-AS1Q8NBB2 130 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 OR5AK3PQ8NH89 298 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 YIPF6Q96EC8 236 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 MRAP2Q96G30 205 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF514Q96K75 400 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-209ENST00000553280 IP6K3Q96PC2 410 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 ASCL3Q9NQ33 180 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 TAS2R13Q9NYV9 303 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 SLC22A14Q9Y267 594 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 PUS1Q9Y606 427 aaKnown RBP eCLIP2.98□□□□□ -1.93
SCFD1-209ENST00000553280 NOS1P29475 1434 aa2.98□□□□□ -1.93
SCFD1-209ENST00000553280 MYBPHLA2RUH7 354 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 CD300LBA8K4G0 201 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 AQP9O43315 295 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 SLC37A4O43826 429 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 TPM3P06753 285 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 SEC11BP0C7V7 166 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 CECR9P0C854 216 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 SLC2A1P11166 492 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 IMPA1P29218 277 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 LINC00315P59091 139 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 TPM4P67936 248 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 HBG1P69891 147 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 HBG2P69892 147 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 UBE2NLQ5JXB2 153 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF678Q5SXM1 525 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 GLYATQ6IB77 296 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms