RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 A0A1W2PPE2 198 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 A0A1W2PR64 198 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 A0A1W2PRV1 198 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 ZNF737O75373 536 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 GNAO1P09471 354 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 ZNF20P17024 532 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 ATF1P18846 271 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 DUSP1P28562 367 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 NPBWR2P48146 333 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 RBP2P50120 134 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 MTCP1P56278 107 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 PROK1P58294 105 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 IL18R1Q13478 541 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 SYS1Q8N2H4 156 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 OR5R1Q8NH85 324 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 CITED1Q99966 193 aa12.93□□□□□ -0.34
CDK4-215ENST00000553237 RBFOX1Q9NWB1 397 aaKnown RBP12.93□□□□□ -0.34
CDK4-215ENST00000553237 TMEM82A0PJX8 343 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 ISG15P05161 165 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 BCL3P20749 454 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 AZGP1P25311 298 aaKnown RBP12.92□□□□□ -0.34
CDK4-215ENST00000553237 TGFBR2P37173 567 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 CCR9P51686 369 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 SNU13P55769 128 aaKnown RBP12.92□□□□□ -0.34
CDK4-215ENST00000553237 LGALS4P56470 323 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 EDDM3AQ14507 147 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 GDPD3Q7L5L3 318 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 C8orf59Q8N0T1 100 aaPredicted RBP12.92□□□□□ -0.34
CDK4-215ENST00000553237 DNAAF1Q8NEP3 725 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 OR51A4Q8NGJ6 313 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 NRG4Q8WWG1 115 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 RFT1Q96AA3 541 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 FGF20Q9NP95 211 aaPredicted RBP12.92□□□□□ -0.34
CDK4-215ENST00000553237 HSPE1-MOB4S4R3N1 261 aa12.92□□□□□ -0.34
CDK4-215ENST00000553237 OR4C45A6NMZ5 311 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 E9PI62 339 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 WIPF1O43516 503 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 TSPAN9O75954 239 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 CLPXO76031 633 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 HAND1O96004 215 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 CYB5AP00167 134 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 OCM2P0CE71 109 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
CDK4-215ENST00000553237 LIMS3P0CW19 117 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 LIMS4P0CW20 117 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 ZNF728P0DKX0 622 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 PRKACBP22694 351 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 GABRR1P24046 479 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 DCKP27707 260 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 DLX6P56179 175 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 ALKBH1Q13686 389 aaKnown RBP12.91□□□□□ -0.34
CDK4-215ENST00000553237 LRRC75BQ2VPJ9 315 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 SLC35E4Q6ICL7 350 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 UTS2BQ765I0 119 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 RNF144BQ7Z419 303 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 LHFPL4Q7Z7J7 247 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 OR8H2Q8N162 312 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 FAM58AQ8N1B3 248 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 ZNF676Q8N7Q3 588 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 TPRX1Q8N7U7 411 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 OR52N4Q8NGI2 321 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 OR13C3Q8NGS6 347 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 TFAP2CQ92754 450 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 SNX22Q96L94 193 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 SPACA5Q96QH8 159 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 JAM3Q9BX67 310 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 CHST6Q9GZX3 395 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 C16orf95Q9H693 158 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 HHLA2Q9UM44 414 aa12.91□□□□□ -0.34
CDK4-215ENST00000553237 IRGMA1A4Y4 181 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 PRKACAP17612 351 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 ETV1P50549 477 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 PDZK1IP1Q13113 114 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 GRK1Q15835 563 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 PLA1AQ53H76 456 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 LHFPL2Q6ZUX7 228 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 Q8IYB0 196 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 OR13C9Q8NGT0 318 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 PPP1R35Q8TAP8 253 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 OPALINQ96PE5 141 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 TCF7L1Q9HCS4 588 aa12.9□□□□□ -0.34
CDK4-215ENST00000553237 TRBV2A0A0J9YWF9 115 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 H0YHG0 523 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 KCNAB3O43448 404 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 PSPNO60542 156 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 ARG1P05089 322 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 GBX2P52951 348 aaPredicted RBP12.89□□□□□ -0.35
CDK4-215ENST00000553237 MRPL28Q13084 256 aaKnown RBP12.89□□□□□ -0.35
CDK4-215ENST00000553237 ASPHD2Q6ICH7 369 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 LAIR2Q6ISS4 152 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 TCF23Q7RTU1 214 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 OR4S1Q8NGB4 309 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 OR5D18Q8NGL1 313 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 FBLIM1Q8WUP2 373 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 GGHQ92820 318 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 SPSB1Q96BD6 273 aa12.89□□□□□ -0.35
CDK4-215ENST00000553237 DIMT1Q9UNQ2 313 aaKnown RBP12.89□□□□□ -0.35
CDK4-215ENST00000553237 SIGLEC9Q9Y336 463 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms