RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ARSBP15848 533 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 CTLA4P16410 223 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF182P17025 639 aaPredicted RBP4.01□□□□□ -1.77
CKAP4-203ENST00000553039 HTR1DP28221 377 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 MNDAP41218 407 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 CENPAP49450 140 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 SLURP1P55000 103 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 NME5P56597 212 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 FADDQ13158 208 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 FOXE3Q13461 319 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 RIPK1Q13546 671 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 SNCBQ16143 134 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 SNAPC1Q16533 368 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 MLANAQ16655 118 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 ALG10Q5BKT4 473 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 IGSF11Q5DX21 431 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 C1orf146Q5VVC0 180 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 REEP3Q6NUK4 255 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 WDR82Q6UXN9 313 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 HACD2Q6Y1H2 254 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 ARPINQ7Z6K5 226 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 PATL1Q86TB9 770 aaKnown RBP4.01□□□□□ -1.77
CKAP4-203ENST00000553039 DEFB107AQ8IZN7 70 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 ZNRF1Q8ND25 227 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 OR1M1Q8NGA1 313 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 OR9I1Q8NGQ6 314 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF671Q8TAW3 534 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 LIPHQ8WWY8 451 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 SPDL1Q96EA4 605 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 SGTBQ96EQ0 304 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 GAFA1Q96PS6 74 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 MICU1Q9BPX6 476 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 ABHD14AQ9BUJ0 271 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 NUAK2Q9H093 628 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 SPAG4Q9NPE6 437 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 AKIP1Q9NQ31 210 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 GID8Q9NWU2 228 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 DPM3Q9P2X0 92 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 POLR1DQ9Y2S0 133 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 C17orf98A8MV24 154 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 ODF3BA8MYP8 253 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 LEUTXA8MZ59 168 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 C12orf77C9JDV5 145 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 SLC1A7O00341 560 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 HSPA12AO43301 675 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 TPST1O60507 370 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 TPST2O60704 377 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 OR7A10O76100 309 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 SCAF4O95104 1147 aaKnown RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 ATP6V1G2O95670 118 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 IL6P05231 212 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 ACSM4P0C7M7 580 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 GLRA1P23415 457 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 MAPK3P27361 379 aaPredicted RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 CEACAM3P40198 252 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 GPR12P47775 334 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 GMFBP60983 142 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 PSME3P61289 254 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 CBX3Q13185 183 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 GPR50Q13585 617 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 RGNQ15493 299 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 DEFB136Q30KP8 78 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 ANKDD1AQ495B1 522 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 SPATS1Q496A3 300 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 RNASE12Q5GAN4 147 aaKnown RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 ENTPD8Q5MY95 495 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 SAMD4BQ5PRF9 694 aaKnown RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 TMEM268Q5VZI3 342 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF782Q6ZMW2 699 aaPredicted RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 Q6ZSN1 163 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 TMPRSS11FQ6ZWK6 438 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 SLC35E3Q7Z769 313 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 TBC1D26Q86UD7 250 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 FUNDC1Q8IVP5 155 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 STPG2Q8N412 459 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 OR2AJ1Q8NGZ0 328 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 C4orf3Q8WVX3 66 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 SPTSSAQ969W0 71 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 CCDC124Q96CT7 223 aaKnown RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 SEH1LQ96EE3 360 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 SDSLQ96GA7 329 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 NOL4LQ96MY1 436 aaPredicted RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 HOPXQ9BPY8 73 aaPredicted RBP4□□□□□ -1.77
CKAP4-203ENST00000553039 WFDC6Q9BQY6 131 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 TMED9Q9BVK6 235 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 HIPK2Q9H2X6 1198 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 ISYNA1Q9NPH2 558 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 C19orf12Q9NSK7 152 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 RASL12Q9NYN1 266 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 ADA2Q9NZK5 511 aa4□□□□□ -1.77
CKAP4-203ENST00000553039 H0Y980 276 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.99□□□□□ -1.77
CKAP4-203ENST00000553039 CLIC1O00299 241 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ARPC1BO15143 372 aaKnown RBP3.99□□□□□ -1.77
CKAP4-203ENST00000553039 MPPED1O15442 326 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SLC16A7O60669 478 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SERPINA1P01009 418 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 C1QCP02747 245 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 TSPAN19P0C672 248 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 OR8U9P0C7N5 309 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms