RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MYL9P24844 172 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 FGF12P61328 243 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 EMX1Q04741 257 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 NHLRC3Q5JS37 347 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 GPR157Q5UAW9 335 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 UBE2UQ5VVX9 321 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 NCR3LG1Q68D85 454 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 XAF1Q6GPH4 301 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 UNQ9370/PRO34162Q6UXP9 181 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 ASCL4Q6XD76 172 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF841Q6ZN19 808 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 BTN2A1Q7KYR7 527 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 C1QL2Q7Z5L3 287 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 JAGN1Q8N5M9 183 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 TMEM185AQ8NFB2 350 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 Q8NFD4 153 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 OR10AC1Q8NH08 325 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF418Q8TF45 676 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 SLAMF9Q96A28 289 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 OR5M11Q96RB7 305 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 NR1H4Q96RI1 486 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 CCL13Q99616 98 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 TMED9Q9BVK6 235 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 SUCNR1Q9BXA5 334 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 NCOR1P1Q9H4R4 102 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 TAS2R4Q9NYW5 299 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 MTCH1Q9NZJ7 389 aa8.54□□□□□ -1.04
TRAFD1-208ENST00000552890 IGKV1D-17A0A075B6S4 117 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 PNMA8CA0A1B0GUJ8 204 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 A0A1W2PQ09 198 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 hADV38S2A0JD32 116 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 KIAA1324LA8MWY0 1029 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 K7N7A8 449 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 MGST3O14880 152 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 DEGS1O15121 323 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 PHF1O43189 567 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 LALBAP00709 142 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 TK1P04183 234 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 GLAP06280 429 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 UCHL1P09936 223 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 PRKACAP17612 351 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 EGR1P18146 543 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 ERP29P30040 261 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 GMFBP60983 142 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 RPS11P62280 158 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 RPL31P62899 125 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 IKZF1Q13422 519 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 RBM39Q14498 530 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 MPV17LQ2QL34 196 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 FAM201AQ5SY85 155 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 GDPGP1Q6ZNW5 385 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 USP43Q70EL4 1123 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 PHC2Q8IXK0 858 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 SPARTQ8N0X7 666 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 OR8H2Q8N162 312 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 ZFP41Q8N8Y5 198 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 ASCC1Q8N9N2 400 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 OR51T1Q8NGJ9 327 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 H1FXQ92522 213 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 RGP1Q92546 391 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 GAFA1Q96PS6 74 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 DCTN5Q9BTE1 182 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 BARHL1Q9BZE3 327 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 WDR13Q9H1Z4 485 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 METTL8Q9H825 291 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 HEXA-AS1Q9H8Q6 139 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 UNKLQ9H9P5 680 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 ZMAT3Q9HA38 289 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 NOX4Q9NPH5 578 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 NDUFB11Q9NX14 153 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 OR14J1Q9UGF5 321 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF222Q9UK12 451 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 SSR3Q9UNL2 185 aa8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 SIRT4Q9Y6E7 314 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF469Q96JG9 3925 aaPredicted RBP8.52□□□□□ -1.04
TRAFD1-208ENST00000552890 JMJD1CQ15652 2540 aa8.52□□□□□ -1.04
TRAFD1-208ENST00000552890 IGKV1-27A0A075B6S5 117 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 IGHV3OR15-7A0A075B7D8 119 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 TRAV1-2A0A0B4J238 106 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 TRDV1A0A1B0GX56 115 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 CA11O75493 328 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 SC5DO75845 299 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 TOX4O94842 621 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 HAND1O96004 215 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 PLATP00750 562 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 CSN2P05814 226 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF44P15621 663 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 GABRR1P24046 479 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 LMO1P25800 156 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 ZFP36P26651 326 aaKnown RBP8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 PSMB9P28065 219 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 ZP1P60852 638 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 METAP1DQ6UB28 335 aaPredicted RBP8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 LYPD2Q6UXB3 125 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 TPRA1Q86W33 373 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 OSR2Q8N2R0 312 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 BPIFB2Q8N4F0 458 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF565Q8N9K5 539 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 LY6G5BQ8NDX9 201 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms