RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 DUSP1P28562 367 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 GDNFP39905 211 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 C9orf152Q5JTZ5 239 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 BCL2L15Q5TBC7 163 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 PRAMEF5Q5TYX0 476 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 ZNF322Q6U7Q0 402 aaPredicted RBP17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 SLC25A26Q70HW3 274 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 SLC25A19Q9HC21 320 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 TVP23BQ9NYZ1 205 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 U3KQK5 164 aa17.16■□□□□ 0.34
SMARCD1-212ENST00000551966 PSMB11A5LHX3 300 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 DHRS7CA6NNS2 312 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 LEUTXA8MZ59 168 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 CCL1P22362 96 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 GABRR1P24046 479 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 NPBWR2P48146 333 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 CXCR4P61073 352 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 RPL23AP62750 156 aaKnown RBP17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 ZNF91Q05481 1191 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 SNAPC1Q16533 368 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 NKAPLQ5M9Q1 402 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 UTF1Q5T230 341 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 MOB1AQ9H8S9 216 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 MRM2Q9UI43 246 aaKnown RBP17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 SLC7A11Q9UPY5 501 aa17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 UBE2J1Q9Y385 318 aaPredicted RBP17.15■□□□□ 0.34
SMARCD1-212ENST00000551966 FAM172BPA6NC97 362 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 LY6LH3BQJ8 138 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 H3BSH0 61 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 CALCBP10092 127 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 ERP29P30040 261 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 SLX4IPQ5VYV7 408 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 C8orf86Q6ZUL3 223 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 BCDIN3DQ7Z5W3 292 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 RTN4RL2Q86UN3 420 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 OR51D1Q8NGF3 324 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 ZNF596Q8TC21 504 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 TFAP2CQ92754 450 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 EMG1Q92979 244 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 P2RX4Q99571 388 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 MCRIP2Q9BUT9 160 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 ZNF286AQ9HBT8 521 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 PAPOLBQ9NRJ5 636 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 RBFOX1Q9NWB1 397 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 LSM4Q9Y4Z0 139 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 SNX5Q9Y5X3 404 aa17.14■□□□□ 0.33
SMARCD1-212ENST00000551966 H0YHG0 523 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 MGST3O14880 152 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 CDK2P24941 298 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 MYCNOSP40205 109 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 OR3A1P47881 315 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 FUT6P51993 359 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 P2RX3P56373 397 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 DGCR2P98153 550 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 DCTN2Q13561 401 aaKnown RBP17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 ODF4Q2M2E3 257 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 OR52W1Q6IF63 320 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 HEPN1Q6WQI6 88 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 OR2W3Q7Z3T1 314 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 TRAPPC6BQ86SZ2 158 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 ADGRG5Q8IZF4 528 aa17.13■□□□□ 0.33
SMARCD1-212ENST00000551966 B2RBV5 119 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 BUB1B-PAK6H3BSN5 160 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 ZNF146Q15072 292 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 HSP90B2PQ58FF3 399 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 TPTE2P1Q5T6R2 138 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 UNQ9370/PRO34162Q6UXP9 181 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 CORO2AQ92828 525 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 NOL4LQ96MY1 436 aaPredicted RBP17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 CNN2Q99439 309 aaKnown RBP17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 ZNF556Q9HAH1 456 aa17.12■□□□□ 0.33
SMARCD1-212ENST00000551966 M0QZK8 103 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 GNGT2O14610 69 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 PRKYO43930 277 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 ENTPD6O75354 484 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 SNRNP70P08621 437 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 CD34P28906 385 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 CBX1P83916 185 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 HLA-DRB5Q30154 266 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 SLC35F2Q8IXU6 374 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 ENTHD1Q8IYW4 607 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM58AQ8N1B3 248 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 ADGRL4Q9HBW9 690 aa17.11■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A18PA6NE21 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A16PA6NEW6 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A20PA6NIJ5 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A9PA6NNJ1 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A12PA8MX19 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A5PA8MXJ8 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 RPP14O95059 124 aaKnown RBP17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A15PP0C7V4 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A13PP0C7W8 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A14PP0C7W9 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 FAM90A24PP0C7X0 464 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 ANXA8P13928 327 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 BCL3P20749 454 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 LMO1P25800 156 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 GLIPR1P48060 266 aa17.1■□□□□ 0.33
SMARCD1-212ENST00000551966 SNU13P55769 128 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms