RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 HMG20AQ9NP66 347 aa8.8□□□□□ -1
PTCH1-225ENST00000551845 NOX4Q9NPH5 578 aa8.8□□□□□ -1
PTCH1-225ENST00000551845 ACOT13Q9NPJ3 140 aa8.8□□□□□ -1
PTCH1-225ENST00000551845 PCDHB16Q9NRJ7 776 aa8.8□□□□□ -1
PTCH1-225ENST00000551845 RPUSD1Q9UJJ7 312 aaKnown RBP8.8□□□□□ -1
PTCH1-225ENST00000551845 ZNF222Q9UK12 451 aa8.8□□□□□ -1
PTCH1-225ENST00000551845 ING4Q9UNL4 249 aa8.8□□□□□ -1
PTCH1-225ENST00000551845 SONP18583 2426 aaKnown RBP8.8□□□□□ -1
PTCH1-225ENST00000551845 CR1P17927 2039 aa8.8□□□□□ -1
PTCH1-225ENST00000551845 IGKV1-12A0A0C4DH73 117 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 A0A1B0GW55 424 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 C22orf46C9J442 243 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 PIN1P1O15428 100 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 IGKV1D-12P01611 117 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 TFF1P04155 84 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4L2P0CJ85 424 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4L3P0CJ86 424 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4L4P0CJ87 422 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4L5P0CJ88 424 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4L6P0CJ89 424 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4L7P0CJ90 424 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 CALCBP10092 127 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 CPEP16870 476 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 PRKACAP17612 351 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 SRMP19623 302 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 FSTP19883 344 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 PSMA1P25786 263 aaKnown RBP8.79□□□□□ -1
PTCH1-225ENST00000551845 PTGFRP43088 359 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 ZP1P60852 638 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 ARF6P62330 175 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 COL10A1Q03692 680 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 ZNF146Q15072 292 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 RSU1Q15404 277 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 TBCEQ15813 527 aaPredicted RBP8.79□□□□□ -1
PTCH1-225ENST00000551845 ARMCX4Q5H9R4 360 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 SPIN3Q5JUX0 258 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4L9Q6RFH8 374 aaPredicted RBP8.79□□□□□ -1
PTCH1-225ENST00000551845 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
PTCH1-225ENST00000551845 CDH26Q8IXH8 852 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 SPARTQ8N0X7 666 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 LY6G5BQ8NDX9 201 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 PPP1R35Q8TAP8 253 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 TBC1D15Q8TC07 691 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 PHYHIPQ92561 330 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 TMEM203Q969S6 136 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 DACT3Q96B18 629 aaPredicted RBP8.79□□□□□ -1
PTCH1-225ENST00000551845 SNX22Q96L94 193 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 FAM234AQ9H0X4 552 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 METTL9Q9H1A3 318 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 RBFOX1Q9NWB1 397 aaKnown RBP8.79□□□□□ -1
PTCH1-225ENST00000551845 DUX4Q9UBX2 424 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 OPN4Q9UHM6 478 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 GSTK1Q9Y2Q3 226 aa8.79□□□□□ -1
PTCH1-225ENST00000551845 TRAV8-7A0A075B6U6 113 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 A0A1W2PPH5 198 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 K7N7A8 449 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 GABRPO00591 440 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 DEGS1O15121 323 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 ZNF780AO75290 641 aaPredicted RBP8.78□□□□□ -1
PTCH1-225ENST00000551845 FCN3O75636 299 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 TOX4O94842 621 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 HAND1O96004 215 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 CSTBP04080 98 aaKnown RBP8.78□□□□□ -1
PTCH1-225ENST00000551845 TK1P04183 234 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 SFTPBP07988 381 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 SELLP14151 372 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 ADRA2CP18825 462 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 FPR2P25090 351 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 DUSP1P28562 367 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 MTNR1BP49286 362 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 CEBPDP49716 269 aaPredicted RBP8.78□□□□□ -1
PTCH1-225ENST00000551845 FGF12P61328 243 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 GPR176Q14439 515 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 HSD17B12Q53GQ0 312 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 METTL11BQ5VVY1 283 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 ELP2Q6IA86 826 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 CRIP3Q6Q6R5 217 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 ASCL4Q6XD76 172 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 C1QL2Q7Z5L3 287 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 CMTM4Q8IZR5 234 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 FGFRL1Q8N441 504 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 ASCC1Q8N9N2 400 aaKnown RBP8.78□□□□□ -1
PTCH1-225ENST00000551845 FCGR1BQ92637 280 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 FOXRED1Q96CU9 486 aaPredicted RBP8.78□□□□□ -1
PTCH1-225ENST00000551845 FAM192AQ9GZU8 254 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 SLITRK2Q9H156 845 aa8.78□□□□□ -1
PTCH1-225ENST00000551845 EXOSC4Q9NPD3 245 aaKnown RBP8.78□□□□□ -1
PTCH1-225ENST00000551845 TRBV23-1A0A0A0MS06 115 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 A0A1W2PQ09 198 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 SC5DO75845 299 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 ARL6IP5O75915 188 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 HTR3BO95264 441 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 SNU13P55769 128 aaKnown RBP8.77□□□□□ -1.01
PTCH1-225ENST00000551845 SRSF2Q01130 221 aaKnown RBP8.77□□□□□ -1.01
PTCH1-225ENST00000551845 SCN1BQ07699 218 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 BLMHQ13867 455 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 INSL4Q14641 139 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 UBE2UQ5VVX9 321 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 GLT8D1Q68CQ7 371 aa8.77□□□□□ -1.01
PTCH1-225ENST00000551845 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms