RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, human

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK4-209	ENST00000551800	MEF2C	Q06413	473 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	KPNB1	Q14974	876 aa	Known RBP	13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	OXLD1	Q5BKU9	147 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	KPRP	Q5T749	579 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	TMEM42	Q69YG0	159 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	SLC25A26	Q70HW3	274 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	AJUBA	Q96IF1	538 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	SNX22	Q96L94	193 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	CITED2	Q99967	270 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	CLEC7A	Q9BXN2	247 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	GABARAPL3	Q9BY60	117 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	CHST6	Q9GZX3	395 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	SERTAD4	Q9NUC0	356 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK4-209	ENST00000551800	SESN1	Q9Y6P5	492 aa		13.8	□□□□□ -0.2
CDK4-209	ENST00000551800		A6NDX4	124 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	SAC3D1	A6NKF1	404 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	CLIC3	O95833	236 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	HAND1	O96004	215 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	ZNF20	P17024	532 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	BRS3	P32247	399 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	ATP1B3	P54709	279 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	MINOS1	Q5TGZ0	78 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	CCDC121	Q6ZUS5	278 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	DYNAP	Q8N1N2	210 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	CCDC54	Q8NEL0	328 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	OR10H4	Q8NGA5	316 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	OR11H6	Q8NGC7	330 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	STMN2	Q93045	179 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	GAL3ST2	Q9H3Q3	398 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	LINC00312	Q9Y6C7	94 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	MINOS1-NBL1	R4GNA1	71 aa		13.79	□□□□□ -0.2
CDK4-209	ENST00000551800	IGHV2-26	A0A0B4J1V2	119 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	FUOM	A2VDF0	154 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	FAM90A8P	A6NJQ4	464 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	ALPL	P05186	524 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	UBC	P0CG48	685 aa	Known RBP	13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	PRKACA	P17612	351 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	HTR1D	P28221	377 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	LOXL3	P58215	753 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800		Q6ZPA2	131 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	C11orf42	Q8N5U0	333 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	TPRX1	Q8N7U7	411 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	OR4X2	Q8NGF9	303 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	PIFO	Q8TCI5	191 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	PHF21A	Q96BD5	680 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	CHST5	Q9GZS9	411 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	TMEM133	Q9H2Q1	129 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	NEK6	Q9HC98	313 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	WARS2	Q9UGM6	360 aa	Known RBP	13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	MRM2	Q9UI43	246 aa	Known RBP	13.78	□□□□□ -0.2
CDK4-209	ENST00000551800	GNG8	Q9UK08	70 aa		13.78	□□□□□ -0.2
CDK4-209	ENST00000551800		A0A1B0GTI1	187 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	LOC107986453	A0A1B0GWG9	222 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	METTL15	A6NJ78	407 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	RBP2	P50120	134 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	DLX6	P56179	175 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	ERVK11-1	P61568	191 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	TMEM95	Q3KNT9	176 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	OR52W1	Q6IF63	320 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	SSX6	Q7RTT6	188 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	C16orf82	Q7Z2V1	217 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	CATSPERD	Q86XM0	798 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800		Q8N2B8	174 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	PP6455	Q8WZ26	134 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	EME1	Q96AY2	570 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	MTCH1	Q9NZJ7	389 aa		13.77	□□□□□ -0.21
CDK4-209	ENST00000551800	TRGV10	A0A0A0MS01	117 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	SIRPB1	O00241	398 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	ZNF737	O75373	536 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	APOL3	O95236	402 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	OR2T7	P0C7T2	308 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	CCL1	P22362	96 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	HTR1F	P30939	366 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	DYNLT3	P51808	116 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	SLC35A2	P78381	396 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800		Q6ZSR3	168 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	FAM58A	Q8N1B3	248 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	OR5AU1	Q8NGC0	362 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	OR8J1	Q8NGP2	316 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	ZNF596	Q8TC21	504 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	DPF1	Q92782	380 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	RIBC2	Q9H4K1	309 aa		13.76	□□□□□ -0.21
CDK4-209	ENST00000551800	EXOSC4	Q9NPD3	245 aa	Known RBP	13.76	□□□□□ -0.21
CDK4-209	ENST00000551800		A0A1W2PQL4	384 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	TOR1A	O14656	332 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	MGST3	O14880	152 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	IGHA1	P01876	353 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	CEACAM3	P40198	252 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	MTCP1	P56278	107 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	UBE2V2	Q15819	145 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	C9orf152	Q5JTZ5	239 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	SPIN3	Q5JUX0	258 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	ZFP1	Q6P2D0	407 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	LHFPL2	Q6ZUX7	228 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	RFK	Q969G6	155 aa		13.75	□□□□□ -0.21
CDK4-209	ENST00000551800	RNF166	Q96A37	237 aa	Predicted RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms