RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 RFT1Q96AA3 541 aa12.69□□□□□ -0.38
PRPF40B-211ENST00000551063 SPACA5Q96QH8 159 aa12.69□□□□□ -0.38
PRPF40B-211ENST00000551063 UNKLQ9H9P5 680 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-211ENST00000551063 ZMAT3Q9HA38 289 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-211ENST00000551063 ELL3Q9HB65 397 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-211ENST00000551063 HMG20AQ9NP66 347 aa12.69□□□□□ -0.38
PRPF40B-211ENST00000551063 CENPVL3A0A0U1RRI6 287 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 A0A1W2PPH5 198 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 TRIM77I1YAP6 450 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 K7N7A8 449 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 ANGPTL7O43827 346 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 RGS9O75916 674 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 INMTO95050 263 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 ALDOBP05062 364 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 PRKACAP17612 351 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 FSTP19883 344 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 VHLP40337 213 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 BLMHQ13867 455 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 ASCC1Q8N9N2 400 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 PXT1Q8NFP0 134 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 OR51A2Q8NGJ7 313 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 OR13C5Q8NGS8 318 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 TBC1D15Q8TC07 691 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 THRSPQ92748 146 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 SNX22Q96L94 193 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 ZNF48Q96MX3 618 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 DUSP21Q9H596 190 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 PAK1IP1Q9NWT1 392 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 RAB26Q9ULW5 256 aa12.68□□□□□ -0.38
PRPF40B-211ENST00000551063 IGHV1-69DA0A0B4J2H0 117 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 PTGES3LE9PB15 166 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 GPX5O75715 221 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 IGHV1-69P01742 117 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 CELP19835 753 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 RPL31P62899 125 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 IRF3Q14653 427 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 NCR3LG1Q68D85 454 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 BRD3OSQ6XYD6 125 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 RNF144BQ7Z419 303 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 Q8N7P7 452 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 ZDHHC22Q8N966 263 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 LHX4Q969G2 390 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 PRDM13Q9H4Q3 707 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 METTL8Q9H825 291 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 TMEM138Q9NPI0 162 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 IL36RNQ9UBH0 155 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 CKLFQ9UBR5 152 aa12.67□□□□□ -0.38
PRPF40B-211ENST00000551063 TRBV5-7A0A0A0MS05 114 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 GABRPO00591 440 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 TMEM225BP0DP42 221 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 IGFBP3P17936 291 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 PRTN3P24158 256 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 CRHBPP24387 322 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 BDKRB2P30411 391 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 BMXP51813 675 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 DOC2BQ14184 412 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 DDI2Q5TDH0 399 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 RUSC1-AS1Q66K80 236 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 OR52N4Q8NGI2 321 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 OR5D13Q8NGL4 314 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 PPP1R35Q8TAP8 253 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 TNFAIP8L1Q8WVP5 186 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 TNFRSF14Q92956 283 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 GPER1Q99527 375 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 EXOSC4Q9NPD3 245 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 ESM1Q9NQ30 184 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 BLOC1S6Q9UL45 172 aa12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 LSM2Q9Y333 95 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-211ENST00000551063 ANK2Q01484 3957 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 PNMA8CA0A1B0GUJ8 204 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 CLDN34H7C241 214 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 RGS10O43665 173 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 MTNR1BP49286 362 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 UBA52P62987 128 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 SPHARQ15513 63 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 ELP2Q6IA86 826 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 C17orf107Q6ZR85 190 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 GDPD3Q7L5L3 318 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 SGCDQ92629 289 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 CNBD2Q96M20 576 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 OR14A2Q96R54 314 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 NOX4Q9NPH5 578 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 GSTK1Q9Y2Q3 226 aa12.65□□□□□ -0.38
PRPF40B-211ENST00000551063 hCG_1809904A0A1W2PP81 198 aa12.64□□□□□ -0.39
PRPF40B-211ENST00000551063 A0A1W2PPE2 198 aa12.64□□□□□ -0.39
PRPF40B-211ENST00000551063 A0A1W2PR64 198 aa12.64□□□□□ -0.39
PRPF40B-211ENST00000551063 A0A1W2PRV1 198 aa12.64□□□□□ -0.39
PRPF40B-211ENST00000551063 DNAJC9-AS1A6NH13 148 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms