RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IGKV3-11P04433 115 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 EIF4EP06730 217 aaKnown RBP2.95□□□□□ -1.94
LIMA1-205ENST00000550592 CTSLP07711 333 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 CD70P32970 193 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 CA5AP35218 305 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 P2RX1P51575 399 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 RWDD2BP57060 319 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 UBE2NP61088 152 aaKnown RBP2.95□□□□□ -1.94
LIMA1-205ENST00000550592 NCF4Q15080 339 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 IRF4Q15306 451 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 ORMDL2Q53FV1 153 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 PIP5KL1Q5T9C9 394 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 ABHD12BQ7Z5M8 362 aaPredicted RBP2.95□□□□□ -1.94
LIMA1-205ENST00000550592 CBLN2Q8IUK8 224 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 CHST4Q8NCG5 386 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 OR52E5Q8NH55 327 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 UBALD1Q8TB05 177 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 APH1BQ8WW43 257 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 OPALINQ96PE5 141 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 NDFIP1Q9BT67 221 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 SPNS1Q9H2V7 528 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 BEX1Q9HBH7 125 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 ACP6Q9NPH0 428 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 DDX18Q9NVP1 670 aaKnown RBP2.95□□□□□ -1.94
LIMA1-205ENST00000550592 ZNF222Q9UK12 451 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 DDX19BQ9UMR2 479 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 RCL1Q9Y2P8 373 aaKnown RBP2.95□□□□□ -1.94
LIMA1-205ENST00000550592 SAR1BQ9Y6B6 198 aa2.95□□□□□ -1.94
LIMA1-205ENST00000550592 MPDZO75970 2070 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 UQCRHLA0A096LP55 91 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 NCF1BA6NI72 391 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 NCF1CA8MVU1 366 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 SLC16A4O15374 487 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 CTDNEP1O95476 244 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 UQCRHP07919 91 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 ERGP11308 486 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 CLDN18P56856 261 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 PPP1CBP62140 327 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 IRF8Q02556 426 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 LOXL1Q08397 574 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 SYCNQ0VAF6 134 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 EIF4EBP2Q13542 120 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 TPTE2P1Q5T6R2 138 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 FAM71E1Q6IPT2 247 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 MRPL55Q7Z7F7 128 aaKnown RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 APRG1Q8IVJ8 170 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 CSGALNACT2Q8N6G5 542 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 LRRC52Q8N7C0 313 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 C11orf72Q8NBR9 251 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 OR10G6Q8NH81 332 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 PIFOQ8TCI5 191 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 GLYATL2Q8WU03 294 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 PHF10Q8WUB8 498 aaKnown RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 C15orf40Q8WUR7 153 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 PEX13Q92968 403 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 PDXPQ96GD0 296 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 JSRP1Q96MG2 331 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 IP6K3Q96PC2 410 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 KLF6Q99612 283 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 SLC7A5P2Q9GIP4 190 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 MRM3Q9HC36 420 aaKnown RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 MRPL22Q9NWU5 206 aaKnown RBP2.94□□□□□ -1.94
LIMA1-205ENST00000550592 ZNRD1Q9P1U0 126 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 PSME2Q9UL46 239 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 ANK2Q01484 3957 aa2.94□□□□□ -1.94
LIMA1-205ENST00000550592 A0A0U1RQV1 116 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 TSPAN11A1L157 253 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 OR6C74A6NCV1 312 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 SUPT3HB4E1H0 165 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 H7C417 338 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 KPNA3O00505 521 aaPredicted RBP2.93□□□□□ -1.94
LIMA1-205ENST00000550592 BCKDKO14874 412 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 RDH16O75452 317 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 GCM2O75603 506 aaPredicted RBP2.93□□□□□ -1.94
LIMA1-205ENST00000550592 FCN3O75636 299 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 YIF1AO95070 293 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 TPM1P09493 284 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 UBCP0CG48 685 aaKnown RBP2.93□□□□□ -1.94
LIMA1-205ENST00000550592 SSTR5P35346 364 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 SLC1A2P43004 574 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 HCAR3P49019 387 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 ZNF121P58317 390 aaPredicted RBP2.93□□□□□ -1.94
LIMA1-205ENST00000550592 RAD51Q06609 339 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 KIR2DS1Q14954 304 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 AVPI1Q5T686 147 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 Q5W150 140 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 TMEM205Q6UW68 189 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 RAB43Q86YS6 212 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 FAM71AQ8IYT1 594 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 BLIDQ8IZY5 108 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 CBR4Q8N4T8 237 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 C3orf56Q8N813 242 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 OR6Q1Q8NGQ2 317 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 LILRB4Q8NHJ6 448 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 TIMM17AQ99595 171 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 MED10Q9BTT4 135 aa2.93□□□□□ -1.94
LIMA1-205ENST00000550592 BEX2Q9BXY8 128 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms