RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 SGK3Q96BR1 496 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 TGIF2Q9GZN2 237 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 NELFAQ9H3P2 528 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 LOC102725191A0A1B0GVB3 256 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 B4DEV8 164 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF814B7Z6K7 855 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF587BE7ETH6 402 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 E9PLN8 166 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 GPR37O15354 613 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 XRCC2O43543 280 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 PITX3O75364 302 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 TIAF1O95411 115 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 TMEM225BP0DP42 221 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 SRFP11831 508 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 FCGR2AP12318 317 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 PAX1P15863 534 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 MSX1P28360 303 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 GLIPR1P48060 266 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 CSNK1A1P48729 337 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 UBE2KP61086 200 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 RND3P61587 244 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 SMAD4Q13485 552 aaKnown RBP11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 PLPPR5Q32ZL2 321 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF506Q5JVG8 444 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST2H3PS2Q5TEC6 136 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST3H2BBQ8N257 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR10G3Q8NGC4 313 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR52M1Q8NGK5 317 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 POC1BQ8TC44 478 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 PGAM5Q96HS1 289 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 ABHD14BQ96IU4 210 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 METTL7AQ9H8H3 244 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 SDHAF3Q9NRP4 125 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 SEMA5BQ9P283 1151 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 RCL1Q9Y2P8 373 aaKnown RBP11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 CDS2O95674 445 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 CXCL1P09341 107 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 CCL20P78556 96 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 DLK1P80370 383 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF674Q2M3X9 581 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 SP6Q3SY56 376 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 Q3ZCU0 254 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 REC114Q7Z4M0 266 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 KMT5CQ86Y97 462 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR2C3Q8N628 320 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR14L1PQ8NHC6 308 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 TVP23CQ96ET8 276 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 SLC2A9Q9NRM0 540 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 TMEM242Q9NWH2 141 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 MMP24Q9Y5R2 645 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 ADAMTS20P59510 1910 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 ADAMTS9Q9P2N4 1935 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 IGLV3-32A0A0A0MS00 114 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF732B4DXR9 585 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR2J2O76002 312 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 PKIAP61925 76 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 TMEM176BQ3YBM2 270 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 NKAIN1Q4KMZ8 207 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 WDR74Q6RFH5 385 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF429Q86V71 674 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR5L2Q8NGL0 311 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR10D4PQ8NGN7 298 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 M1APQ8TC57 530 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 RBMXL1Q96E39 390 aaKnown RBP11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 LIN37Q96GY3 246 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 OXGR1Q96P68 337 aa11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 HDHD3Q9BSH5 251 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 PTRH2Q9Y3E5 179 aaKnown RBP11.11□□□□□ -0.63
CALCOCO1-217ENST00000549935 FAM230AA0A1W2PPH8 454 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF850A8MQ14 1090 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF727A8MUV8 499 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 HSPA12AO43301 675 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 SCAF4O95104 1147 aaKnown RBP11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 QDPRP09417 244 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 RD3LP0DJH9 198 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 NR2C1P13056 603 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 CEACAM1P13688 526 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 KLK2P20151 261 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 OTX1P32242 354 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 ERVFRD-1P60508 538 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 SRPXP78539 464 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 ICAM4Q14773 271 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 LBHQ53QV2 105 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 SPNS3Q6ZMD2 512 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 CCDC71LQ8N9Z2 235 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 MOB3AQ96BX8 217 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 PIGQQ9BRB3 760 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 AK3Q9UIJ7 227 aa11.1□□□□□ -0.63
CALCOCO1-217ENST00000549935 IGLV3-12A0A075B6K2 115 aa11.09□□□□□ -0.63
CALCOCO1-217ENST00000549935 CCDC187A0A096LP49 1063 aa11.09□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF726A6NNF4 738 aa11.09□□□□□ -0.63
CALCOCO1-217ENST00000549935 GABRR1P24046 479 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms