RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 WDR89Q96FK6 387 aaPredicted RBP8.55□□□□□ -1.04
RAB5B-206ENST00000549505 TAAR6Q96RI8 345 aa8.55□□□□□ -1.04
RAB5B-206ENST00000549505 CRIM1Q9NZV1 1036 aa8.55□□□□□ -1.04
RAB5B-206ENST00000549505 WASF3Q9UPY6 502 aa8.55□□□□□ -1.04
RAB5B-206ENST00000549505 WDR87Q6ZQQ6 2873 aa8.55□□□□□ -1.04
RAB5B-206ENST00000549505 ALPK2Q86TB3 2170 aa8.55□□□□□ -1.04
RAB5B-206ENST00000549505 LRP5LA4QPB2 252 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 GEMIN2O14893 280 aaKnown RBP8.54□□□□□ -1.04
RAB5B-206ENST00000549505 FOSL1P15407 271 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 ZNF250P15622 560 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 TIMP3P35625 211 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 IL13RA1P78552 427 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 MRPL49Q13405 166 aaKnown RBP8.54□□□□□ -1.04
RAB5B-206ENST00000549505 C21orf62-AS1Q17RA5 79 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 NKPD1Q17RQ9 610 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 RSPO4Q2I0M5 234 aaPredicted RBP8.54□□□□□ -1.04
RAB5B-206ENST00000549505 SCGB2B2Q4G0G5 96 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 MBNL2Q5VZF2 373 aaKnown RBP8.54□□□□□ -1.04
RAB5B-206ENST00000549505 TMUB2Q71RG4 321 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 FBXL14Q8N1E6 418 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 PIGCQ92535 297 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 TOLLIPQ9H0E2 274 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 FXYD6Q9H0Q3 95 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 MTCH1Q9NZJ7 389 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 ST3GAL6Q9Y274 331 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 TUSC2O75896 110 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 NGFP01138 241 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 IGHV3-9P01782 118 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 CD79AP11912 226 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 CHRFAM7AQ494W8 412 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 HIKESHIQ53FT3 197 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 CLEC18BQ6UXF7 455 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 SEM1Q6ZVN7 128 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 C9orf106Q8NAJ2 232 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 NPRL2Q8WTW4 380 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 FAAP24Q9BTP7 215 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 ZNF71Q9NQZ8 489 aaPredicted RBP8.54□□□□□ -1.04
RAB5B-206ENST00000549505 F8VVB4 439 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 F8VWA3 439 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 J3QT63 122 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 ANGPTL7O43827 346 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 WDR1O75083 606 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 RPL35P42766 123 aaKnown RBP8.54□□□□□ -1.04
RAB5B-206ENST00000549505 FAM185AQ8N0U4 392 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 POC1AQ8NBT0 407 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 CMSS1Q9BQ75 279 aaKnown RBP8.54□□□□□ -1.04
RAB5B-206ENST00000549505 Q9N2K0 584 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 UBQLN2Q9UHD9 624 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 TUBD1Q9UJT1 453 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 AMDHD2Q9Y303 409 aa8.54□□□□□ -1.04
RAB5B-206ENST00000549505 ANKRD30BLA7E2S9 258 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 CEACAM8P31997 349 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 ZNF81P51508 661 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 NOVA1P51513 510 aaKnown RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 PMP22Q01453 160 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 EXOSC2Q13868 293 aaKnown RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 KRTCAP3Q53RY4 240 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 LIN54Q6MZP7 749 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 C3P1Q6ZMU1 363 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 KCTD9Q7L273 389 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 COQ8AQ8NI60 647 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 STOML3Q8TAV4 291 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 VRK1Q99986 396 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 CABLES2Q9BTV7 478 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 ZNF286AQ9HBT8 521 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 SDK1Q7Z5N4 2213 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 L7N2F9 121 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 CTXN2P0C2S0 81 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 SDHBP21912 280 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 MDH2P40926 338 aaKnown RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 TAGLNQ01995 201 aaKnown RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 ZNF146Q15072 292 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 TAF9Q16594 264 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 DEFB109BQ30KR1 87 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 PIGYQ3MUY2 71 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 Q6P435 159 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 FAM122CQ6P4D5 195 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 GALNT11Q8NCW6 608 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 STARD4Q96DR4 205 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 MARS2Q96GW9 593 aaKnown RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 PAPOLGQ9BWT3 736 aaKnown RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 LIME1Q9H400 295 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 SAV1Q9H4B6 383 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-206ENST00000549505 DNAJB11Q9UBS4 358 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 MAB21L2Q9Y586 359 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 PCNX2A6NKB5 2137 aa8.53□□□□□ -1.04
RAB5B-206ENST00000549505 CRYABP02511 175 aaKnown RBP8.52□□□□□ -1.05
RAB5B-206ENST00000549505 BCL3P20749 454 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 GABRR1P24046 479 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 LMO1P25800 156 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 AP2S1P53680 142 aaPredicted RBP8.52□□□□□ -1.05
RAB5B-206ENST00000549505 B2MP61769 119 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 NAAAQ02083 359 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 UNQ6126/PRO20091Q6UXV3 157 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 SLC25A26Q70HW3 274 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 P4HA3Q7Z4N8 544 aa8.52□□□□□ -1.05
RAB5B-206ENST00000549505 TMED4Q7Z7H5 227 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms