RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SUCNR1Q9BXA5 334 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 SPACA1Q9HBV2 294 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 MRPS18CQ9Y3D5 142 aaKnown RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 DHRS7CA6NNS2 312 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 NPIPA2E9PIF3 369 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 NPIPA3F8WFD2 350 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 CBR3O75828 277 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 B2MP61769 119 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 CYCSP99999 105 aaKnown RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 FABP9Q0Z7S8 132 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 HABP2Q14520 560 aaPredicted RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 CLEC12BQ2HXU8 276 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 MIDNQ504T8 468 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 OR5AS1Q8N127 324 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF845Q96IR2 970 aaPredicted RBP9.66□□□□□ -0.86
LINC00661-204ENST00000549354 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
LINC00661-204ENST00000549354 IGKV1-9A0A0C4DH69 117 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 AQP7P3A6NL99 342 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 DBX1A6NMT0 343 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 F8VVB4 439 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 F8VWA3 439 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 TSPAN15O95858 294 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 APOC1P02654 83 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 S100A9P06702 114 aaKnown RBP9.65□□□□□ -0.86
LINC00661-204ENST00000549354 EIF2S3LQ2VIR3 472 aaKnown RBP9.65□□□□□ -0.86
LINC00661-204ENST00000549354 AADACL3Q5VUY0 350 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 KCNG3Q8TAE7 436 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 NMES1Q9C002 83 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 OR10A2Q9H208 303 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 A0A1W2PPE2 198 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 LOC390937A0A1W2PQ73 354 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 COLCA2A8K830 154 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM14DPA8MWL7 114 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 PTGER4P35408 488 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 RAB5BP61020 215 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 SLC35A1P78382 337 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 HIST3H3Q16695 136 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 SNAI3Q3KNW1 292 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 ABCA11PQ4W5N1 156 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 ACER2Q5QJU3 275 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 NCMAPQ5T1S8 102 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 HES3Q5TGS1 186 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 LYPD6Q86Y78 171 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 RBMXL1Q96E39 390 aaKnown RBP9.65□□□□□ -0.86
LINC00661-204ENST00000549354 C2orf50Q96LR7 162 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 OXGR1Q96P68 337 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 SLC5A7Q9GZV3 580 aa9.65□□□□□ -0.86
LINC00661-204ENST00000549354 PUS1Q9Y606 427 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00661-204ENST00000549354 C1orf196B1AJZ1 125 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 GPR37O15354 613 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 TRAF3IP2O43734 574 aaPredicted RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ISG15P05161 165 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ZNF16P17020 682 aaPredicted RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 HOXA4Q00056 320 aaPredicted RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 UBE2V2Q15819 145 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ZNF774Q6NX45 483 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ASB13Q8WXK3 278 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 SH3BGRL3Q9H299 93 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 RGCCQ9H4X1 137 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 MYOZ1Q9NP98 299 aaPredicted RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 MCTS1Q9ULC4 181 aaKnown RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 C14orf166Q9Y224 244 aaKnown RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 APC2O95996 2303 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 HKR1P10072 659 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ZNF708P17019 499 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 B3GALT5-AS1P59052 145 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 RSU1Q15404 277 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 TRIP6Q15654 476 aaKnown RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 AWAT1Q58HT5 328 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 DHRS13Q6UX07 377 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 OR6X1Q8NH79 312 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ZNF442Q9H7R0 627 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 PARD6AQ9NPB6 346 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 RELNP78509 3460 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ABCA4P78363 2273 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 CEP295Q9C0D2 2601 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 CDRT15L2A8MXV6 281 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 HPNP05981 417 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 ZNF44P15621 663 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 HLA-GP17693 338 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 CSNK1A1P48729 337 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 TAS2R31P59538 309 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 THEM4Q5T1C6 240 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 LYZL2Q7Z4W2 148 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 SULF2Q8IWU5 870 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 FNDC9Q8TBE3 224 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 PLPPR2Q96GM1 343 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 URM1Q9BTM9 101 aaKnown RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 TMEM100Q9NV29 134 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 GHRLQ9UBU3 117 aa9.64□□□□□ -0.87
LINC00661-204ENST00000549354 CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
LINC00661-204ENST00000549354 CST7O76096 145 aa9.63□□□□□ -0.87
LINC00661-204ENST00000549354 PGA4P0DJD7 388 aa9.63□□□□□ -0.87
LINC00661-204ENST00000549354 PGA3P0DJD8 388 aa9.63□□□□□ -0.87
LINC00661-204ENST00000549354 SRD5A2P31213 254 aa9.63□□□□□ -0.87
LINC00661-204ENST00000549354 CTAG1AP78358 180 aa9.63□□□□□ -0.87
LINC00661-204ENST00000549354 SRSF4Q08170 494 aaKnown RBP9.63□□□□□ -0.87
LINC00661-204ENST00000549354 DEGS2Q6QHC5 323 aa9.63□□□□□ -0.87
LINC00661-204ENST00000549354 IL1F10Q8WWZ1 152 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms