RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ADAT1Q9BUB4 502 aaKnown RBP3.23□□□□□ -1.89
CBX5-203ENST00000547872 EGLN3Q9H6Z9 239 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 MTHFD2LQ9H903 347 aaPredicted RBP3.23□□□□□ -1.89
CBX5-203ENST00000547872 POLE3Q9NRF9 147 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 NINJ2Q9NZG7 142 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 P2RX2Q9UBL9 471 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 TBK1Q9UHD2 729 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 LINC00527Q9UJ94 153 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 ZNF256Q9Y2P7 627 aaPredicted RBP3.23□□□□□ -1.89
CBX5-203ENST00000547872 N6AMT1Q9Y5N5 214 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 KPTNQ9Y664 436 aa3.23□□□□□ -1.89
CBX5-203ENST00000547872 TRAV38-1A0A0B4J264 116 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 SMIM23A6NLE4 172 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 CPSF4LA6NMK7 179 aaKnown RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 F8VVB4 439 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 F8VWA3 439 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 LGALS8O00214 317 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 FAAHO00519 579 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 NDUFB3O43676 98 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 ALDOBP05062 364 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 ARG1P05089 322 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 KITLGP21583 273 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 RPS4Y1P22090 263 aaKnown RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 AQP1P29972 269 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 MAGEA12P43365 314 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 CEBPDP49716 269 aaPredicted RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 CAPZA1P52907 286 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 DHODHQ02127 395 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 SLC34A1Q06495 639 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 SRSF9Q13242 221 aaKnown RBP eCLIP3.22□□□□□ -1.89
CBX5-203ENST00000547872 MAB21L1Q13394 359 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 DYNC1I2Q13409 638 aaKnown RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 KCNJ8Q15842 424 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 SSX2Q16385 188 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 SPANXN4Q5MJ08 99 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 CLEC12AQ5QGZ9 265 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 NCR3LG1Q68D85 454 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 LRRC74BQ6ZQY2 392 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 NANOGNBQ7Z5D8 188 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 MKXQ8IYA7 352 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 MICU2Q8IYU8 434 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 DYNAPQ8N1N2 210 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 LINC00471Q8N535 108 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 OR8G5Q8NG78 346 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 OR6X1Q8NH79 312 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 PSMA8Q8TAA3 256 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 ADAMTS16Q8TE57 1224 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 LRRC29Q8WV35 223 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 CAPSLQ8WWF8 208 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 HIST1H2ACQ93077 130 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 NABP1Q96AH0 204 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 DUS3LQ96G46 650 aaKnown RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 SLC25A44Q96H78 314 aaPredicted RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 FCRL1Q96LA6 429 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 PPP3R2Q96LZ3 170 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 TRNT1Q96Q11 434 aaKnown RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 RAB3IPQ96QF0 476 aaPredicted RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 PANX1Q96RD7 426 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 ZNF607Q96SK3 696 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 EDA2RQ9HAV5 297 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 TMEM100Q9NV29 134 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 MRPL39Q9NYK5 338 aaKnown RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 ADA2Q9NZK5 511 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 ZNF391Q9UJN7 358 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 POLR1DQ9Y2S0 133 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 UTP11Q9Y3A2 253 aaKnown RBP3.22□□□□□ -1.89
CBX5-203ENST00000547872 TMED5Q9Y3A6 229 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 HILPDAQ9Y5L2 63 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 DNAJC15Q9Y5T4 150 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 DNAH3Q8TD57 4116 aa3.22□□□□□ -1.89
CBX5-203ENST00000547872 LYSTQ99698 3801 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 HUWE1Q7Z6Z7 4374 aaKnown RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 A0A1W2PRG6 482 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 PSMB11A5LHX3 300 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 NKX6-3A6NJ46 265 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 TRIM64CA6NLI5 447 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 C5orf58C9J3I9 102 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 G3V2L1 256 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 TPST2O60704 377 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 ANP32DO95626 131 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 HCKP08631 526 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 SNRPAP09012 282 aaKnown RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 SPP1P10451 314 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 PIPP12273 146 aaPredicted RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 ACADSP16219 412 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 FUT1P19526 365 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 PRPS1L1P21108 318 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 PAICSP22234 425 aaKnown RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 GUCA1AP43080 201 aaPredicted RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 GABRA2P47869 451 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 GSK3BP49841 420 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 SERPINB9P50453 376 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 UBE2E1P51965 193 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 CRISP3P54108 245 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 RGS8P57771 180 aaPredicted RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 PCK2Q16822 640 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 LRRC10Q5BKY1 277 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 C6orf136Q5SQH8 315 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 C9orf66Q5T8R8 295 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 ZYG11AQ6WRX3 759 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms