RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 WIPI1Q5MNZ9 446 aaPredicted RBP11.32□□□□□ -0.6
BRF1-210ENST00000547374 A0A0J9YW62 118 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 A0A1W2PQM1 296 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 SHISA7A6NL88 538 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 ZFP92A6NM28 416 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 OR2C1O95371 312 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 FABP1P07148 127 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 HLA-GP17693 338 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 AADACP22760 399 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 NPBWR2P48146 333 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 HAS2Q92819 552 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 SYT3Q9BQG1 590 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 SUCNR1Q9BXA5 334 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 MTCH2Q9Y6C9 303 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 HSPA12AO43301 675 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
BRF1-210ENST00000547374 GSK3AP49840 483 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 C9orf152Q5JTZ5 239 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 OPN5Q6U736 354 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 SLC35G3Q8N808 338 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 ZNF286AQ9HBT8 521 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 WFDC1Q9HC57 220 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 LY86O95711 162 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 SULT1A2P50226 295 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 UBE2KP61086 200 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 NAAAQ02083 359 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 KIAA0141Q14154 515 aaPredicted RBP11.31□□□□□ -0.6
BRF1-210ENST00000547374 TSC22D1Q15714 1073 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
BRF1-210ENST00000547374 GPR157Q5UAW9 335 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
BRF1-210ENST00000547374 ARPC4-TTLL3A0A0A6YYG9 625 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 NSG1A0A0A6YYJ2 146 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 E5RGE8 158 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 RBMXL2O75526 392 aaKnown RBP11.3□□□□□ -0.6
BRF1-210ENST00000547374 DEDDO75618 318 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 CARD18P57730 90 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
BRF1-210ENST00000547374 LCN15Q6UWW0 184 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 RPS19BP1Q86WX3 136 aaKnown RBP11.3□□□□□ -0.6
BRF1-210ENST00000547374 LYPD6Q86Y78 171 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 NFAM1Q8NET5 270 aaPredicted RBP11.3□□□□□ -0.6
BRF1-210ENST00000547374 ZNF488Q96MN9 340 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 SMOC1Q9H4F8 434 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 AQP7P3A6NL99 342 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 ZNF724A8MTY0 619 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 NKX2-1P43699 371 aaPredicted RBP11.3□□□□□ -0.6
BRF1-210ENST00000547374 SULT1A1P50225 295 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 CCL20P78556 96 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 OR10AD1Q8NGE0 317 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 CHST5Q9GZS9 411 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 NAA60Q9H7X0 242 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 IL36RNQ9UBH0 155 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 CADP27708 2225 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 COLCA2A8K830 154 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 NDUFA2O43678 99 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 HAAOP46952 286 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 HLA-BQ31612 363 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 NSUN5P2Q63ZY6 315 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 SLC23A3Q6PIS1 610 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 HIST2H3AQ71DI3 136 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 SAT2Q96F10 170 aaPredicted RBP11.3□□□□□ -0.6
BRF1-210ENST00000547374 CALHM2Q9HA72 323 aa11.3□□□□□ -0.6
BRF1-210ENST00000547374 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
BRF1-210ENST00000547374 C9J4A7 227 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 TAAR5O14804 337 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 SRFP11831 508 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 MSX1P28360 303 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 THBS4P35443 961 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 ENDOGQ14249 297 aaKnown RBP11.29□□□□□ -0.6
BRF1-210ENST00000547374 OR2B11Q5JQS5 317 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 LGI3Q8N145 548 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 ABHD3Q8WU67 409 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 PBDC1Q9BVG4 233 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 KCNS2Q9ULS6 477 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
BRF1-210ENST00000547374 PATE3B3GLJ2 98 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 ADAM20O43506 726 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 FCGR3AP08637 254 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 IAPPP10997 89 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 GPM6AP51674 278 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 FGF8P55075 233 aaPredicted RBP11.29□□□□□ -0.6
BRF1-210ENST00000547374 SPATA46Q5T0L3 261 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 OSR2Q8N2R0 312 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 TP53RKQ96S44 253 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 DNAJB11Q9UBS4 358 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
BRF1-210ENST00000547374 H0YL77 283 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 GDF1P27539 372 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 MRPS34P82930 218 aaKnown RBP11.29□□□□□ -0.6
BRF1-210ENST00000547374 ZNF92Q03936 586 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 AKR1C8PQ5T2L2 129 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 PP6455Q8WZ26 134 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 S100PBPQ96BU1 408 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms